Commit 91cbb8fd authored by Peter van 't Hof's avatar Peter van 't Hof

Fix style

parent 85116b8c
......@@ -17,7 +17,7 @@ package nl.lumc.sasc.biopet.extensions.picard
import java.io.File
import nl.lumc.sasc.biopet.utils.config.Configurable
import org.broadinstitute.gatk.utils.commandline.{Input, Output}
import org.broadinstitute.gatk.utils.commandline.{ Input, Output }
/**
* Created by sajvanderzeeuw on 6-10-15.
......
......@@ -18,7 +18,7 @@ import java.io.File
import java.util
import nl.lumc.sasc.biopet.core.extensions.Md5sum
import nl.lumc.sasc.biopet.core.{BiopetQScript, PipelineCommand}
import nl.lumc.sasc.biopet.core.{ BiopetQScript, PipelineCommand }
import nl.lumc.sasc.biopet.extensions._
import nl.lumc.sasc.biopet.extensions.gatk.CombineVariants
import nl.lumc.sasc.biopet.extensions.picard.NormalizeFasta
......@@ -40,7 +40,7 @@ class DownloadGenomes(val root: Configurable) extends QScript with BiopetQScript
override def fixedValues = Map("gffread" -> Map("T" -> true))
override def defaults = Map("normalizefasta" -> Map("line_length" -> 60))
override def defaults = Map("normalizefasta" -> Map("line_length" -> 60))
val downloadAnnotations: Boolean = config("download_annotations", default = false)
......
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