Commit 5f95892e authored by Peter van 't Hof's avatar Peter van 't Hof

change to non-freevar

parent f072f096
...@@ -40,7 +40,7 @@ trait BiopetCommandLineFunction extends CommandLineResources { biopetFunction => ...@@ -40,7 +40,7 @@ trait BiopetCommandLineFunction extends CommandLineResources { biopetFunction =>
def defaultRemoteCommand = "bash" def defaultRemoteCommand = "bash"
private val remoteCommand: String = config("remote_command", default = defaultRemoteCommand) private val remoteCommand: String = config("remote_command", default = defaultRemoteCommand)
val preCommands: List[String] = config("pre_commands", default = Nil) val preCommands: List[String] = config("pre_commands", default = Nil, freeVar = false)
private def changeScript(file: File): Unit = { private def changeScript(file: File): Unit = {
val lines = Source.fromFile(file).getLines().toList val lines = Source.fromFile(file).getLines().toList
......
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