Commit 50b8f109 authored by Peter van 't Hof's avatar Peter van 't Hof

Fixed output files

parent 83f7e56d
......@@ -135,6 +135,7 @@ class QcCommand(val parent: Configurable, val fastqc: Fastqc, val read: String)
case _ => seqtk.output
}
t.outputStats = new File(output.getParentFile, s"${flexiprep.sampleId.getOrElse("x")}-${flexiprep.libId.getOrElse("x")}.$read.trim.stats")
outputFiles :+= t.outputStats
addPipeJob(t)
}
......
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