Commit 46647f54 authored by Peter van 't Hof's avatar Peter van 't Hof

Merge comments

parent 8e18c15e
......@@ -39,7 +39,10 @@ object SamplesTsvToConfig extends ToolCommand {
}
opt[File]('o', "outputFile") unbounded () valueName "<file>" action { (x, c) =>
c.copy(outputFile = Some(x))
} text "When extension is .yml or .yaml output is in yaml format, otherwise in json. When not given output goes to stdout as yaml."
} text """
|When extension is .yml or .yaml the output is in yaml format, otherwise in json.
|When not given the output goes to stdout as yaml.
""".stripMargin
}
/** Executes SamplesTsvToJson */
......
......@@ -21,7 +21,7 @@ pages:
- Toucan (Annotation): 'pipelines/toucan.md'
- Tools:
- AnnotateVcfWithBed: 'tools/AnnotateVcfWithBed.md'
- SamplesTsvToJson: 'tools/SamplesTsvToConfig.md'
- SamplesTsvToConfig: 'tools/SamplesTsvToConfig.md'
- BedToInterval: 'tools/bedtointerval.md'
- BastyGenerateFasta: 'tools/BastyGenerateFasta.md'
- BedToInterval: 'tools/bedtointerval.md'
......
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