Commit 1a7d4610 authored by rhpvorderman's avatar rhpvorderman

Disabled default M flag

parent 19f463b7
......@@ -42,7 +42,7 @@ class BwaMem(val parent: Configurable) extends Bwa with Reference {
var k: Option[Int] = config("k")
var r: Option[Float] = config("r")
var S: Boolean = config("S", default = false)
var M: Boolean = config("M", default = true)
var M: Boolean = config("M", default = false)
var w: Option[Int] = config("w")
var d: Option[Int] = config("d")
var c: Option[Int] = config("c")
......
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