Commit 172d242a authored by Peter van 't Hof's avatar Peter van 't Hof Committed by GitHub

Merge branch 'develop' into fix-BIOPET-635

parents a00d02ff 261ebe2a
......@@ -230,6 +230,7 @@ class Flexiprep(val parent: Configurable) extends QScript with SummaryQScript wi
pipe.deps ::= fastqcR2.output
pipe.deps ::= R1_in
pipe.deps ::= R2_in.get
pipe.nCoresRequest = Some(4)
pipe.isIntermediate = !keepQcFastqFiles
addSummarizable(pipe, "qc_cmd")
add(pipe)
......@@ -239,6 +240,7 @@ class Flexiprep(val parent: Configurable) extends QScript with SummaryQScript wi
R1 = fqSync.outputFastq1
R2 = Some(fqSync.outputFastq2)
} else {
qcCmdR1.nCoresRequest = Some(2)
add(qcCmdR1)
R1 = qcCmdR1.output
}
......
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