Commits · master · Mirrors / biopet.biopet

25 Apr, 2017 13 commits
- Merge pull request #93 from biopet/release-0.9.0 · be7838f2
  Peter van 't Hof authored Apr 25, 2017
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Release 0.9.0
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  be7838f2
- Fixed rna coverage plot · 70d48352
  Peter van 't Hof authored Apr 25, 2017
  
  70d48352
- Bump version to 0.9.0 · c4dca161
  Peter van 't Hof authored Apr 25, 2017
  
  c4dca161
- Fixing gatk versions · b9e9107b
  Peter van 't Hof authored Apr 25, 2017
  
  b9e9107b
- Adding licence · 03e11ce8
  Peter van 't Hof authored Apr 25, 2017
  
  03e11ce8
- Bump to 0.9.0-RC1 · 1ef9b735
  Peter van 't Hof authored Apr 25, 2017
  
  1ef9b735
- Merge pull request #90 from biopet/fix-BIOPET-645 · 6a6c8673
  Peter van 't Hof authored Apr 25, 2017
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Fixing small bug for coming release
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  6a6c8673
- Fixing gearssingle report · 40ddc1b7
  Peter van 't Hof authored Apr 25, 2017
  
  40ddc1b7
- Change futures · 0740963c
  Peter van 't Hof authored Apr 25, 2017
  
  0740963c
- Change futures · 65897482
  Peter van 't Hof authored Apr 25, 2017
  
  65897482
- Fixing names · c7e64e0c
  Peter van 't Hof authored Apr 25, 2017
  
  c7e64e0c
- Fixing compile errors · 7e69b265
  Peter van 't Hof authored Apr 25, 2017
  
  7e69b265
- Adding sample and library to summary when flexiprep is executed · ddc06b36
  Peter van 't Hof authored Apr 25, 2017
  
  ddc06b36
24 Apr, 2017 13 commits
- fixing unit tests · e9a7187e
  Peter van 't Hof authored Apr 24, 2017
  
  e9a7187e
- Rename config value · 1d22fa44
  Peter van 't Hof authored Apr 24, 2017
  
  1d22fa44
- Fixed intermediates · b770117f
  Peter van 't Hof authored Apr 24, 2017
  
  b770117f
- Fixing unit tests · af816bfa
  Peter van 't Hof authored Apr 24, 2017
  
  af816bfa
- Fixed summary output file · 8b2b1732
  Peter van 't Hof authored Apr 24, 2017
  
  8b2b1732
- Removed indelrealignment from library level · 95e63289
  Peter van 't Hof authored Apr 24, 2017
  
  95e63289
- Fixed md5 output files · 9c692ecf
  Peter van 't Hof authored Apr 24, 2017
  
  9c692ecf
- Change readgroups library for aligners · f1d8cf79
  Peter van 't Hof authored Apr 24, 2017
  
  f1d8cf79
- Fixing compile error · 00cd14f3
  Peter van 't Hof authored Apr 24, 2017
  
  00cd14f3
- Fixing krona plots for centrifuge and kraken · 9a538c59
  Peter van 't Hof authored Apr 24, 2017
  
  9a538c59
- WIP · 40109cd0
  Peter van 't Hof authored Apr 24, 2017
  
  40109cd0
- Fixing var names · e2dcb312
  Peter van 't Hof authored Apr 24, 2017
  
  e2dcb312
- Fixing intermediate files · 0e1722a0
  Peter van 't Hof authored Apr 24, 2017
  
  0e1722a0
21 Apr, 2017 10 commits
- Merge pull request #88 from biopet/fix-BIOPET-645 · 6f3ac600
  Peter van 't Hof authored Apr 21, 2017
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Corrections on threads
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  6f3ac600
- Merge pull request #89 from biopet/fix-BIOPET-662 · 684a0963
  Peter van 't Hof authored Apr 21, 2017
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fixes for sv calling
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  684a0963
- Merge branch 'develop' into fix-BIOPET-662 · 850675bc
  Peter van 't Hof authored Apr 21, 2017
  
  850675bc
- increasing memory · ce31186d
  akaljuvee authored Apr 21, 2017
  
  ce31186d
- Fixing fraction method (again) · b79725a1
  Peter van 't Hof authored Apr 21, 2017
  
  b79725a1
- one log line · b9173a70
  akaljuvee authored Apr 21, 2017
  
  b9173a70
- Fixing fraction method · ae86fc82
  Peter van 't Hof authored Apr 21, 2017
  
  ae86fc82
- Added scala docs · 2e7179ef
  Peter van 't Hof authored Apr 21, 2017
  
  2e7179ef
- Make readgroup_library a config value · 0b3c1e25
  Peter van 't Hof authored Apr 21, 2017
  
  0b3c1e25
- Removing defaults · 74845bd6
  Peter van 't Hof authored Apr 21, 2017
  
  74845bd6
20 Apr, 2017 4 commits
- Moved value to the correct place · 3287d8c4
  Peter van 't Hof authored Apr 20, 2017
  
  3287d8c4
- - · 3d2cbc8a
  akaljuvee authored Apr 20, 2017
  
  3d2cbc8a
- Fixing test · e7cccb43
  Peter van 't Hof authored Apr 20, 2017
  
  e7cccb43
- Fix memory corrections · 82c3422b
  Peter van 't Hof authored Apr 20, 2017
  
  82c3422b