Commits · f6bbd1b0d197dfb7038371b9bde87cf95747c0ab · Mirrors / biopet.biopet

22 Aug, 2014 1 commit
- Added allSitePLs option · f6bbd1b0
  Peter van 't Hof authored Aug 22, 2014
  
  f6bbd1b0
20 Aug, 2014 1 commit
- Added BamOutput Option to Haplotypecaller · 8e97fe15
  Peter van 't Hof authored Aug 20, 2014
  
  8e97fe15
11 Aug, 2014 1 commit
- Removed unused imports · 48524cb0
  Peter van 't Hof authored Aug 11, 2014
  
  48524cb0
29 Jul, 2014 1 commit
- changed function to extensions · dd4f0175
  Peter van 't Hof authored Jul 29, 2014
  
  dd4f0175
23 Jul, 2014 1 commit
- Update code style using scalariform · 02b571a4
  bow authored Jul 23, 2014
  
  02b571a4
22 Jul, 2014 1 commit
- Changes in config class · 6294de9f
  Peter van 't Hof authored Jul 22, 2014
  
  6294de9f
21 Jul, 2014 1 commit
- Collected all gatk pipelines/artifacts into 1 maven project · 79435a29
  Peter van 't Hof authored Jul 21, 2014
  
  79435a29
18 Jul, 2014 1 commit
- Added min_mapping_quality_score to haplotypecaller · ae952d4c
  Peter van 't Hof authored Jul 18, 2014
  
  ae952d4c
15 Jul, 2014 2 commits
- Update to Queue/GATK 3.2 · 0a33b3d3
  Peter van 't Hof authored Jul 15, 2014
  
  0a33b3d3
- Add QC plot for base recal · 448cb3dd
  Peter van 't Hof authored Jul 15, 2014
  
  448cb3dd
14 Jul, 2014 1 commit
- Added variantcalling pipeline based on bam files · c19f372f
  Peter van 't Hof authored Jul 14, 2014
  
  c19f372f