Commits · f1d8cf79de824890e17219bf1be9453ee56b27e5 · Mirrors / biopet.biopet

24 Apr, 2017 6 commits
- Change readgroups library for aligners · f1d8cf79
  Peter van 't Hof authored Apr 24, 2017
  
  f1d8cf79
- Fixing compile error · 00cd14f3
  Peter van 't Hof authored Apr 24, 2017
  
  00cd14f3
- Fixing krona plots for centrifuge and kraken · 9a538c59
  Peter van 't Hof authored Apr 24, 2017
  
  9a538c59
- WIP · 40109cd0
  Peter van 't Hof authored Apr 24, 2017
  
  40109cd0
- Fixing var names · e2dcb312
  Peter van 't Hof authored Apr 24, 2017
  
  e2dcb312
- Fixing intermediate files · 0e1722a0
  Peter van 't Hof authored Apr 24, 2017
  
  0e1722a0
21 Apr, 2017 10 commits
- Merge pull request #88 from biopet/fix-BIOPET-645 · 6f3ac600
  Peter van 't Hof authored Apr 21, 2017
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Corrections on threads
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  6f3ac600
- Merge pull request #89 from biopet/fix-BIOPET-662 · 684a0963
  Peter van 't Hof authored Apr 21, 2017
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fixes for sv calling
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  684a0963
- Merge branch 'develop' into fix-BIOPET-662 · 850675bc
  Peter van 't Hof authored Apr 21, 2017
  
  850675bc
- increasing memory · ce31186d
  akaljuvee authored Apr 21, 2017
  
  ce31186d
- Fixing fraction method (again) · b79725a1
  Peter van 't Hof authored Apr 21, 2017
  
  b79725a1
- one log line · b9173a70
  akaljuvee authored Apr 21, 2017
  
  b9173a70
- Fixing fraction method · ae86fc82
  Peter van 't Hof authored Apr 21, 2017
  
  ae86fc82
- Added scala docs · 2e7179ef
  Peter van 't Hof authored Apr 21, 2017
  
  2e7179ef
- Make readgroup_library a config value · 0b3c1e25
  Peter van 't Hof authored Apr 21, 2017
  
  0b3c1e25
- Removing defaults · 74845bd6
  Peter van 't Hof authored Apr 21, 2017
  
  74845bd6
20 Apr, 2017 18 commits
- Moved value to the correct place · 3287d8c4
  Peter van 't Hof authored Apr 20, 2017
  
  3287d8c4
- - · 3d2cbc8a
  akaljuvee authored Apr 20, 2017
  
  3d2cbc8a
- Fixing test · e7cccb43
  Peter van 't Hof authored Apr 20, 2017
  
  e7cccb43
- Fix memory corrections · 82c3422b
  Peter van 't Hof authored Apr 20, 2017
  
  82c3422b
- Typo · ba3a17d4
  Peter van 't Hof authored Apr 20, 2017
  
  ba3a17d4
- filling the samples table · 273091b4
  akaljuvee authored Apr 20, 2017
  
  273091b4
- Adding missing output files · 0ebc7e0a
  Peter van 't Hof authored Apr 20, 2017
  
  0ebc7e0a
- Fix compile error · 4fee107f
  Peter van 't Hof authored Apr 20, 2017
  
  4fee107f
- Fixing temp files · 112a7299
  Peter van 't Hof authored Apr 20, 2017
  
  112a7299
- Merge pull request #85 from biopet/fix-BIOPET-661 · 42e2ffe3
  Peter van 't Hof authored Apr 20, 2017
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Fixed bam input
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  42e2ffe3
- Fixing temp files · 6d672983
  Peter van 't Hof authored Apr 20, 2017
  
  6d672983
- Fixed bam input · d2c7fc48
  Peter van 't Hof authored Apr 20, 2017
  
  d2c7fc48
- Merge pull request #84 from biopet/fix-BIOPET-659 · 7d179c4e
  Peter van 't Hof authored Apr 20, 2017
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Fixing scatter jobs
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  7d179c4e
- Merge branch 'develop' into fix-BIOPET-659 · 190b7590
  Peter van 't Hof authored Apr 20, 2017
  
  190b7590
- Fixing job script · 0d996e40
  Peter van 't Hof authored Apr 20, 2017
  
  0d996e40
- Merge pull request #83 from biopet/fix-heatmap-margins · 11260a4c
  Sander Bollen authored Apr 20, 2017
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Fix margins for heatmaps
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  11260a4c
- Update gatk repo · dda90b04
  Peter van 't Hof authored Apr 20, 2017
  
  dda90b04
- Fix scatter dir · ddc0aa69
  Peter van 't Hof authored Apr 20, 2017
  
  ddc0aa69
19 Apr, 2017 6 commits
- Merge branch 'develop' into fix-heatmap-margins · 75ca4f74
  Peter van 't Hof authored Apr 19, 2017
  
  75ca4f74
- Merge pull request #76 from biopet/fix-BIOPET-655 · 6f78cb16
  Peter van 't Hof authored Apr 19, 2017
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Adding a printreads tests
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  6f78cb16
- Merge branch 'develop' into fix-BIOPET-655 · dc1777d2
  Peter van 't Hof authored Apr 19, 2017
  
  dc1777d2
- Merge branch 'develop' into fix-heatmap-margins · 361a7771
  Sander Bollen authored Apr 19, 2017
  
  361a7771
- Merge pull request #78 from biopet/fix-BIOPET-368 · b031a6e7
  Peter van 't Hof authored Apr 19, 2017
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Adding gender aware variantcalling for gvcf mode
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  b031a6e7
- Fix compile error · 6132f59d
  Peter van 't Hof authored Apr 19, 2017
  
  6132f59d