# Conflicts:
#	toucan/src/main/scala/nl/lumc/sasc/biopet/pipelines/toucan/Toucan.scala

Toucan groups

Fixes #315 and adds some for #324 

See merge request !385

Added grep as extension



See merge request !388

# Conflicts:
#	biopet-tools-extensions/src/test/scala/nl/lumc/sasc/biopet/extensions/tools/VcfFilterTest.scala
#	public/biopet-tools-extensions/src/test/scala/VcfFilterTest.scala
#	public/biopet-tools-extensions/src/test/scala/nl/lumc/sasc/biopet/extensions/tools/VcfFilterTest.scala

Added exclusion for gatk tools

This is related to #332 

See merge request !382