Commits · 9968c43a3db56ce40ae8f52fa03e28271ed59931 · Mirrors / biopet.biopet

12 Jan, 2016 5 commits
- Style fixes · 9968c43a
  Peter van 't Hof authored Jan 12, 2016
  
  9968c43a
- Added rna metrics plot · dd6189e2
  Peter van 't Hof authored Jan 12, 2016
  
  dd6189e2
- Only show wgs if executed · b9f23956
  Peter van 't Hof authored Jan 12, 2016
  
  b9f23956
- Fix reference tag · 81d36084
  Peter van 't Hof authored Jan 12, 2016
  
  81d36084
- Fixed report types · 9034e179
  Peter van 't Hof authored Jan 12, 2016
  
  9034e179
11 Jan, 2016 5 commits
- Added front · be731b74
  Peter van 't Hof authored Jan 11, 2016
  
  be731b74
- Switch shiva to general multisample report · b0f9d027
  Peter van 't Hof authored Jan 11, 2016
  
  b0f9d027
- Added report to multisample mapping · b44d0a54
  Peter van 't Hof authored Jan 11, 2016
  
  b44d0a54
- Move generic pages to multisamplemapping · aa8071f2
  Peter van 't Hof authored Jan 11, 2016
  
  aa8071f2
- Style fix · 203a0c98
  Peter van 't Hof authored Jan 11, 2016
  
  203a0c98
08 Jan, 2016 3 commits
- Style changes · 96efe61e
  Peter van 't Hof authored Jan 08, 2016
  
  96efe61e
- Fix output file for tophat step · e3fd97af
  Peter van 't Hof authored Jan 08, 2016
  
  e3fd97af
- Fixed rna metrics · 565f3979
  Peter van 't Hof authored Jan 08, 2016
  
  565f3979
06 Jan, 2016 2 commits
- Fixed typo · fa4b60f8
  Peter van 't Hof authored Jan 06, 2016
  
  fa4b60f8
- Moved summaryFile · 4143a145
  Peter van 't Hof authored Jan 06, 2016
  
  4143a145
05 Jan, 2016 1 commit
- Fix temp files in mapping · 748dd6c2
  Peter van 't Hof authored Jan 05, 2016
  
  748dd6c2
29 Dec, 2015 1 commit
- Move Bowtie2 to package bowtie · 76383bf1
  Peter van 't Hof authored Dec 29, 2015
  
  76383bf1
28 Dec, 2015 6 commits
- Added whitespace · 28a34d76
  Peter van 't Hof authored Dec 28, 2015
  
  28a34d76
- Added md5 check · 4fd461e8
  Peter van 't Hof authored Dec 28, 2015
  
  4fd461e8
- Fixed intermediate files · 330377f0
  Peter van 't Hof authored Dec 28, 2015
  
  330377f0
- Fix format · 4078fca2
  Peter van 't Hof authored Dec 28, 2015
  
  4078fca2
- Fixed output dir · f2c27a88
  Peter van 't Hof authored Dec 28, 2015
  
  f2c27a88
- Fixed traits · 7accfa72
  Peter van 't Hof authored Dec 28, 2015
  
  7accfa72
22 Dec, 2015 1 commit
- Switch shiva to multisample mapping · b1e56b71
  Peter van 't Hof authored Dec 22, 2015
  
  b1e56b71
21 Dec, 2015 3 commits
- Added files to summary · 31a835a1
  Peter van 't Hof authored Dec 21, 2015
  
  31a835a1
- Add bam linking · 7501f792
  Peter van 't Hof authored Dec 21, 2015
  
  7501f792
- Adding merge strategies · 10d0ce96
  Peter van 't Hof authored Dec 21, 2015
  
  10d0ce96
18 Dec, 2015 4 commits
- Init setup for multisample mapping pipeline · a416a47b
  Peter van 't Hof authored Dec 18, 2015
  
  a416a47b
- Change back to get · 7e542a61
  Peter van 't Hof authored Dec 18, 2015
  
  7e542a61
- More fail safe · a6d7e825
  Peter van 't Hof authored Dec 18, 2015
  
  a6d7e825
- Simplify · 8d9d194b
  Peter van 't Hof authored Dec 18, 2015
  
  8d9d194b
26 Nov, 2015 1 commit
- Fix bowtie2 readgroup · ac61c9dd
  Wai Yi Leung authored Nov 26, 2015
  
  ac61c9dd
25 Nov, 2015 2 commits
- Style reformat after compiling · cb684be5
  Wai Yi Leung authored Nov 25, 2015
  
  cb684be5
- Add bowtie2 to Mapping (and add wrapper for bowtie2) · 6c3cd444
  Wai Yi Leung authored Nov 25, 2015
  
  6c3cd444
19 Nov, 2015 1 commit
- Fixed bug in loading the mainClass for biopet tools · 7f424eb9
  Peter van 't Hof authored Nov 19, 2015
  
  7f424eb9
02 Nov, 2015 2 commits
- changes in gsnap piping and fix bug in fastqsync · 0a897753
  Sander van der Zeeuw authored Nov 02, 2015
  
  0a897753
- Added sunburst plot to mapping and shiva · 89bc7d9a
  Peter van 't Hof authored Nov 02, 2015
  
  89bc7d9a
30 Oct, 2015 1 commit
- Adding Gears to summary output of Mapping · 72a96f7e
  Wai Yi Leung authored Oct 30, 2015
  
  72a96f7e
16 Oct, 2015 1 commit
- Style fix · c6ebdcae
  Peter van 't Hof authored Oct 16, 2015
  
  c6ebdcae
15 Oct, 2015 1 commit
- Rename file · f8785ed4
  Peter van 't Hof authored Oct 15, 2015
  
  f8785ed4