Commits · 8fa9668acfc12badc7fe956ddee9a8d5be8951ea · Mirrors / biopet.biopet

14 Apr, 2017 6 commits
- Merge pull request #69 from biopet/fix-BIOPET-654 · 8fa9668a
  Peter van 't Hof authored Apr 14, 2017
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Remove default arguments
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  8fa9668a
- Merge branch 'develop' into fix-BIOPET-654 · 310bcfe4
  Peter van 't Hof authored Apr 14, 2017
  
  310bcfe4
- Merge pull request #71 from biopet/fix-BIOPET-651 · 8c5573ad
  Peter van 't Hof authored Apr 14, 2017
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Adding a adapter cutoff for fastqc -> cutadapt
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  8c5573ad
- Merge branch 'develop' into fix-BIOPET-651 · 5e121141
  Peter van 't Hof authored Apr 14, 2017
  
  5e121141
- Merge branch 'develop' into fix-BIOPET-654 · 8c2a6ec8
  Peter van 't Hof authored Apr 14, 2017
  
  8c2a6ec8
- Merge pull request #68 from biopet/fix-BIOPET-640 · 865f33cf
  Peter van 't Hof authored Apr 14, 2017
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Fixing report failures
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  865f33cf
13 Apr, 2017 6 commits
- Merge remote-tracking branch 'remotes/origin/develop' into fix-BIOPET-651 · d336ee60
  Peter van 't Hof authored Apr 13, 2017
  
  d336ee60
- Merge branch 'develop' into fix-BIOPET-654 · fa948c3a
  Peter van 't Hof authored Apr 13, 2017
  
  fa948c3a
- Merge branch 'develop' into fix-BIOPET-640 · b20ce2ee
  Peter van 't Hof authored Apr 13, 2017
  
  b20ce2ee
- Merge pull request #70 from biopet/fix-BIOPET-635 · abeeb845
  Peter van 't Hof authored Apr 13, 2017
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Fixing small bug
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  abeeb845
- Style fixes · beeb89dc
  Peter van 't Hof authored Apr 13, 2017
  
  beeb89dc
- Fixing small bug · de3e8ea9
  Peter van 't Hof authored Apr 13, 2017
  
  de3e8ea9
12 Apr, 2017 4 commits
- Adding a adapter cutoff for fastqc -> cutadapt · d6f1be2d
  Peter van 't Hof authored Apr 12, 2017
  
  d6f1be2d
- Remove default arguments · bf522ad0
  Peter van 't Hof authored Apr 12, 2017
  
  bf522ad0
- Merge branch 'develop' into fix-BIOPET-640 · 3b0bc744
  Peter van 't Hof authored Apr 12, 2017
  
  3b0bc744
- Fixing capture of failures · ce94a022
  Peter van 't Hof authored Apr 12, 2017
  
  ce94a022
11 Apr, 2017 17 commits
- Merge pull request #67 from biopet/CleverFixVCF · 7a95865b
  Peter van 't Hof authored Apr 11, 2017
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Clever fix vcf
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  7a95865b
- Merge branch 'develop' into CleverFixVCF · 701feb37
  Peter van 't Hof authored Apr 11, 2017
  
  701feb37
- Merge remote-tracking branch 'remotes/origin/develop' into fix-BIOPET-640 · 916fe0d4
  Peter van 't Hof authored Apr 11, 2017
  
  916fe0d4
- Merge pull request #62 from biopet/fix-BIOPET-639 · 91b0b5f5
  Peter van 't Hof authored Apr 11, 2017
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Fixing fastqc plots
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  91b0b5f5
- Match test VCF header · 132dcfd7
  imoustakas authored Apr 11, 2017
  
  132dcfd7
- Merge branch 'develop' into fix-BIOPET-639 · 9fd0a2f5
  Peter van 't Hof authored Apr 11, 2017
  
  9fd0a2f5
- Merge pull request #58 from biopet/fix-BIOPET-635 · 19f463b7
  Peter van 't Hof authored Apr 11, 2017
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Option to skip printreads and give bqsr files to the variantcalller
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  19f463b7
- Remove redundent queries · 85054669
  Peter van 't Hof authored Apr 11, 2017
  
  85054669
- remove new line · 2e0e9889
  imoustakas authored Apr 11, 2017
  
  2e0e9889
- Add one more line when fixing the VCF file header of Clever · 0ce6a444
  imoustakas authored Apr 11, 2017
  
  0ce6a444
- Merge branch 'develop' into fix-BIOPET-635 · c37b0388
  Peter van 't Hof authored Apr 11, 2017
  
  c37b0388
- Fix some comments · 598f2b3d
  Peter van 't Hof authored Apr 11, 2017
  
  598f2b3d
- Merge branch 'develop' into fix-BIOPET-639 · 6278dc7a
  Peter van 't Hof authored Apr 11, 2017
  
  6278dc7a
- Merge pull request #65 from biopet/fix-BIOPET-642 · af88febc
  Peter van 't Hof authored Apr 11, 2017
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Fixing nullpointer
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  af88febc
- Merge branch 'develop' into fix-BIOPET-635 · 3e35c32b
  Peter van 't Hof authored Apr 11, 2017
  
  3e35c32b
- Merge branch 'develop' into fix-BIOPET-642 · 1a99be40
  Peter van 't Hof authored Apr 11, 2017
  
  1a99be40
- Merge remote-tracking branch 'remotes/origin/develop' into fix-BIOPET-639 · b9a0fe35
  Peter van 't Hof authored Apr 11, 2017
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# Conflicts:
#	biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/report/ReportBuilder.scala
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  b9a0fe35
10 Apr, 2017 7 commits
- Merge pull request #57 from biopet/fix-BIOPET-618 · 625bb514
  Peter van 't Hof authored Apr 10, 2017
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Making the report builder complete future proof
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  625bb514
- Merge branch 'develop' into fix-BIOPET-618 · ea77da34
  Peter van 't Hof authored Apr 10, 2017
  
  ea77da34
- Merge pull request #66 from biopet/ShivaSvCalling_docs · abda4ca3
  Peter van 't Hof authored Apr 10, 2017
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Add ShivaSvCalling documentation
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  abda4ca3
- Fix compile issues · f01537f1
  Peter van 't Hof authored Apr 10, 2017
  
  f01537f1
- Switching to Future.successful · a9eae104
  Peter van 't Hof authored Apr 10, 2017
  
  a9eae104
- Add ShivaSvCalling documentation · 3ee54932
  imoustakas authored Apr 10, 2017
  
  3ee54932
- Updated some comments · dcb9fd03
  Peter van 't Hof authored Apr 10, 2017
  
  dcb9fd03