Commits · 8c0431ee433ba70ece1ec88516ea57edaf6fe121 · Mirrors / biopet.biopet

21 Jul, 2017 1 commit
- Adding option to also run qiime with multiple samples at once · 8c0431ee
  pjvan_thof authored Jul 21, 2017
  
  8c0431ee
13 Jul, 2017 1 commit
- Inspection round pipelines · caf71f04
  Peter van 't Hof authored Jul 13, 2017
  
  caf71f04
10 May, 2017 2 commits
- mark fastq merge steps as intermediate · a0c3f7b1
  Sander Bollen authored May 10, 2017
  
  a0c3f7b1
- fix test failure · 4c9089f9
  Sander Bollen authored May 10, 2017
  
  4c9089f9
09 May, 2017 2 commits
- refactor refactor · 40789f0e
  Sander Bollen authored May 09, 2017
  
  40789f0e
- if indirectly called, input files do not exist yet before run time · cba99be1
  Sander Bollen authored May 09, 2017
  
  cba99be1
04 May, 2017 1 commit
- refactor such that gears output is accessible beofre jobs are added to graph · 2048be3d
  Sander Bollen authored May 04, 2017
  
  2048be3d
26 Apr, 2017 1 commit
- Formatted scala files with scalafmt · e5bbde4d
  Ruben Vorderman authored Apr 26, 2017
  
  e5bbde4d
25 Apr, 2017 5 commits
- Change futures · 0740963c
  pjvan_thof authored Apr 25, 2017
  
  0740963c
- Change futures · 65897482
  pjvan_thof authored Apr 25, 2017
  
  65897482
- Fixing names · c7e64e0c
  pjvan_thof authored Apr 25, 2017
  
  c7e64e0c
- Fixing compile errors · 7e69b265
  pjvan_thof authored Apr 25, 2017
  
  7e69b265
- Adding sample and library to summary when flexiprep is executed · ddc06b36
  Peter van 't Hof authored Apr 25, 2017
  
  ddc06b36
14 Apr, 2017 1 commit
- Fix outputname issue · ae0a5dfd
  Ruben Vorderman authored Apr 14, 2017
  
  ae0a5dfd
20 Mar, 2017 1 commit
- Adding more output files to gearssingle · a2c870b2
  Peter van 't Hof authored Mar 20, 2017
  
  a2c870b2
24 Feb, 2017 1 commit
- Remove old summary code and fixed dependencies for report · 166530dc
  Peter van 't Hof authored Feb 24, 2017
  
  166530dc
16 Feb, 2017 1 commit
- Start to convert report class · f8f8af38
  Peter van 't Hof authored Feb 16, 2017
  
  f8f8af38
09 Feb, 2017 1 commit
- Rename root to parent · dcff73d6
  Peter van 't Hof authored Feb 09, 2017
  
  dcff73d6
07 Feb, 2017 1 commit
- Fixing gears merge step · 64de449b
  Peter van 't Hof authored Feb 07, 2017
  
  64de449b
25 Jan, 2017 1 commit
- Make centrifuge usable output method · bc930d51
  Peter van 't Hof authored Jan 25, 2017
  
  bc930d51
07 Nov, 2016 1 commit
- Fix format · f25519d7
  Peter van 't Hof authored Nov 07, 2016
  
  f25519d7
04 Nov, 2016 2 commits
- Fix for BIOPET-398 · 204c72d0
  Peter van 't Hof authored Nov 04, 2016
  
  204c72d0
- Add fix for BIOPET-411 · 8cb19f0f
  Peter van 't Hof authored Nov 04, 2016
  
  8cb19f0f
19 Sep, 2016 1 commit
- Added centrifuge to Gears · deced04c
  Peter van 't Hof authored Sep 19, 2016
  
  deced04c
21 Jun, 2016 1 commit
- Changed test for gears · 75470c69
  Peter van 't Hof authored Jun 21, 2016
  
  75470c69
20 Jun, 2016 1 commit
- Added open reference method · 7657016c
  Peter van 't Hof authored Jun 20, 2016
  
  7657016c
13 Jun, 2016 2 commits
- Style fixes · 20d86c78
  Peter van 't Hof authored Jun 13, 2016
  
  20d86c78
- Fixed gears tests · 65aa873f
  Peter van 't Hof authored Jun 13, 2016
  
  65aa873f
25 May, 2016 1 commit
- change ALL licenses across all files. · 55b1b7dd
  Sander Bollen authored May 25, 2016
  
  55b1b7dd
27 Apr, 2016 1 commit
- Move public to root · 49517b11
  Peter van 't Hof authored Apr 27, 2016
  
  49517b11
15 Mar, 2016 1 commit
- Fix missing name refactorings · 00a24e74
  Peter van 't Hof authored Mar 15, 2016
  
  00a24e74
14 Mar, 2016 1 commit
- General refactor Biopet · c8f56975
  Sander van der Zeeuw authored Mar 14, 2016
  
  c8f56975
03 Mar, 2016 1 commit
- Fixed summary · 99ef67e0
  Peter van 't Hof authored Mar 03, 2016
  
  99ef67e0
05 Feb, 2016 1 commit
- Added documentation · 2bfef3ed
  Peter van 't Hof authored Feb 05, 2016
  
  2bfef3ed
29 Dec, 2015 4 commits
- Remove unused lines · ea2bdb56
  Peter van 't Hof authored Dec 29, 2015
  
  ea2bdb56
- Added count seqs · 3b55324c
  Peter van 't Hof authored Dec 29, 2015
  
  3b55324c
- Added combine reads for GearsSingle · 03c15ef3
  Peter van 't Hof authored Dec 29, 2015
  
  03c15ef3
- Moved flash as general job · b5c6727b
  Peter van 't Hof authored Dec 29, 2015
  
  b5c6727b
18 Dec, 2015 2 commits
- Add settings · 86e7d090
  Peter van 't Hof authored Dec 18, 2015
  
  86e7d090
- Fixed double flexiprep · 8acebe9a
  Peter van 't Hof authored Dec 18, 2015
  
  8acebe9a