Commits · 510d5df78903d0fad777c7597e7c10b4208e7a97 · Mirrors / biopet.biopet

31 May, 2017 2 commits
- Fixing unit test · 510d5df7
  pjvan_thof authored May 31, 2017
  
  510d5df7
- Get script from cache · aa9ebe95
  Peter van 't Hof authored May 31, 2017
  
  aa9ebe95
30 May, 2017 18 commits
- Merge pull request #113 from biopet/fix-BIOPET-689 · 5701e4a0
  Peter van 't Hof authored May 30, 2017
```
Fixed bug when python file already exist
```
  5701e4a0
- Merge branch 'develop' into fix-BIOPET-689 · 9b0a28d9
  Peter van 't Hof authored May 30, 2017
  
  9b0a28d9
- Merge pull request #123 from biopet/fix-BIOPET-692 · 8f379bbd
  Peter van 't Hof authored May 30, 2017
```
tiny fixes for Flexiprep report 
```
  8f379bbd
- Fixing format and code warnings · 9d2f670e
  pjvan_thof authored May 30, 2017
  
  9d2f670e
- Merge branch 'develop' into fix-BIOPET-692 · 71df0901
  Peter van 't Hof authored May 30, 2017
  
  71df0901
- Merge pull request #116 from biopet/fix-BIOPET-543 · 24771b48
  Peter van 't Hof authored May 30, 2017
```
Adding validation step for annotation files in Gentrap
```
  24771b48
- Fixing code warnings · 6f905cea
  pjvan_thof authored May 30, 2017
  
  6f905cea
- Fixing unit tests for kopisu · 751392ed
  pjvan_thof authored May 30, 2017
  
  751392ed
- Fix format · 34569681
  pjvan_thof authored May 30, 2017
  
  34569681
- Merge branch 'develop' into fix-BIOPET-692 · ef042b1f
  Peter van 't Hof authored May 30, 2017
  
  ef042b1f
- fix for displaying sample names · 67e57298
  akaljuvee authored May 30, 2017
  
  67e57298
- tiny fix · b593a099
  akaljuvee authored May 30, 2017
  
  b593a099
- Adding posibility to continue even when annotation files are incorrect · 8869ac19
  Peter van 't Hof authored May 30, 2017
  
  8869ac19
- Added gtf files of cufflinks jobs · 0c8b91e5
  Peter van 't Hof authored May 30, 2017
  
  0c8b91e5
- Remove non-required statements · ed94dba8
  Peter van 't Hof authored May 30, 2017
  
  ed94dba8
- Merge branch 'develop' into fix-BIOPET-689 · 2c6305d3
  Peter van 't Hof authored May 30, 2017
  
  2c6305d3
- Merge branch 'develop' into fix-BIOPET-543 · e32324e4
  Peter van 't Hof authored May 30, 2017
  
  e32324e4
- Merge pull request #118 from biopet/fix-BIOPET-678 · f99febca
  Peter van 't Hof authored May 30, 2017
```
Adding unit tests to RefflatStats
```
  f99febca
29 May, 2017 16 commits
- Merge branch 'develop' into fix-BIOPET-689 · dd74b155
  Peter van 't Hof authored May 29, 2017
  
  dd74b155
- Merge branch 'develop' into fix-BIOPET-543 · 75428c97
  Peter van 't Hof authored May 29, 2017
  
  75428c97
- Merge branch 'develop' into fix-BIOPET-678 · 5f88d9a5
  Peter van 't Hof authored May 29, 2017
  
  5f88d9a5
- Merge pull request #121 from biopet/fix-BIOPET-696 · 3f9c0897
  Peter van 't Hof authored May 29, 2017
```
Make peakcalling from bam files possible
```
  3f9c0897
- if script already is absolute path, use that · c28ac35b
  Sander Bollen authored May 29, 2017
  
  c28ac35b
- Format fixes · a032c8f2
  Peter van 't Hof authored May 29, 2017
  
  a032c8f2
- Merge branch 'develop' into fix-BIOPET-696 · 425c3385
  Peter van 't Hof authored May 29, 2017
  
  425c3385
- Merge pull request #120 from biopet/fix-BIOPET-676 · d5e089d1
  Peter van 't Hof authored May 29, 2017
```
Group small scatters together
```
  d5e089d1
- Merge branch 'develop' into fix-BIOPET-676 · 14568895
  Peter van 't Hof authored May 29, 2017
  
  14568895
- Merge pull request #119 from biopet/fix-BIOPET-695 · c23cac9a
  Peter van 't Hof authored May 29, 2017
```
Adding Autogenerated README to DownloadGenomes
```
  c23cac9a
- Merge branch 'develop' into fix-BIOPET-695 · 1ec377c6
  Peter van 't Hof authored May 29, 2017
  
  1ec377c6
- Adding peakcalling to executable · 4f72db9c
  Peter van 't Hof authored May 29, 2017
  
  4f72db9c
- Merge branch 'develop' into fix-BIOPET-696 · bf4d534c
  Peter van 't Hof authored May 29, 2017
  
  bf4d534c
- Merge pull request #117 from biopet/fix-BIOPET-693 · c9449b48
  Peter van 't Hof authored May 29, 2017
```
Fixing HTML report of mapping
```
  c9449b48
- Make peakcalling from bam files possible · 0754c573
  Peter van 't Hof authored May 29, 2017
  
  0754c573
- Fix code warnings · 2b0ed023
  Peter van 't Hof authored May 29, 2017
  
  2b0ed023
28 May, 2017 4 commits
- Fixing unit tests · a313a325
  Peter van 't Hof authored May 28, 2017
  
  a313a325
- Format fix · 3b139a79
  Peter van 't Hof authored May 28, 2017
  
  3b139a79
- Fixed grouping · cfc95280
  Peter van 't Hof authored May 28, 2017
  
  cfc95280
- Raise default threads to 4 · ce4caebd
  Peter van 't Hof authored May 28, 2017
  
  ce4caebd