Commits · 463f800212227d21c8949454481afbc38a9a5cfd · Mirrors / biopet.biopet

25 Jan, 2017 2 commits
- Added unassigned reads to krona plot for centrifuge · e3400a8a
  Peter van 't Hof authored Jan 25, 2017
  
  e3400a8a
- Style issues · 270dfad0
  Peter van 't Hof authored Jan 25, 2017
  
  270dfad0
23 Jan, 2017 1 commit
- Adding licence to code · 2fc77904
  Peter van 't Hof authored Jan 23, 2017
  
  2fc77904
22 Jan, 2017 1 commit
- Fixed insertsize plot · 6fc498a4
  Peter van 't Hof authored Jan 22, 2017
  
  6fc498a4
07 Jan, 2017 1 commit
- Added status to nodes · 6a024afb
  Peter van 't Hof authored Jan 07, 2017
  
  6a024afb
05 Jan, 2017 2 commits
- Change from error to warning · 3c73be57
  Peter van 't Hof authored Jan 05, 2017
  
  3c73be57
- Added a check on empty files · 86ecb782
  Peter van 't Hof authored Jan 05, 2017
  
  86ecb782
04 Jan, 2017 4 commits
- Fixing Biopet-493 · 24a1b29e
  Peter van 't Hof authored Jan 04, 2017
  
  24a1b29e
- Added script template · b632a8b4
  Peter van 't Hof authored Jan 04, 2017
  
  b632a8b4
- Added gentrap template · cb103a38
  Peter van 't Hof authored Jan 04, 2017
  
  cb103a38
- Added mapping_to_gears · 921de0c8
  Peter van 't Hof authored Jan 04, 2017
  
  921de0c8
22 Dec, 2016 1 commit
- Fix style · e8ea73f7
  Peter van 't Hof authored Dec 22, 2016
  
  e8ea73f7
20 Dec, 2016 1 commit
- Fix comments on merge request · f7fb0c72
  Peter van 't Hof authored Dec 20, 2016
  
  f7fb0c72
18 Dec, 2016 1 commit
- Adding genral config for MultiSampleMapping · 78a3291b
  Peter van 't Hof authored Dec 18, 2016
  
  78a3291b
15 Dec, 2016 4 commits
- Fixing stackoverflow · eb40009e
  Peter van 't Hof authored Dec 15, 2016
  
  eb40009e
- Fixed compile issues · c11614e9
  Peter van 't Hof authored Dec 15, 2016
  
  c11614e9
- Added default to multisample mapping · ba8bfc42
  Peter van 't Hof authored Dec 15, 2016
  
  ba8bfc42
- Added an option to not keep the final bam file · 42de7719
  Peter van 't Hof authored Dec 15, 2016
  
  42de7719
02 Dec, 2016 2 commits
- Changes to the documentation for developers. · b5f0c35a
  Pappas authored Dec 02, 2016
  
  b5f0c35a
- Added intermendiate tags · 8242e484
  Peter van 't Hof authored Dec 02, 2016
  
  8242e484
29 Nov, 2016 2 commits
- Fixing BIOPET-481 · 2373dae2
  Peter van 't Hof authored Nov 29, 2016
  
  2373dae2
- Invert option, true is default now · b4e999f0
  Peter van 't Hof authored Nov 29, 2016
  
  b4e999f0
26 Nov, 2016 1 commit
- Added main flag to most main jobs · 00e96408
  Peter van 't Hof authored Nov 26, 2016
  
  00e96408
25 Nov, 2016 1 commit
- Fixed path · a4292fbc
  Peter van 't Hof authored Nov 25, 2016
  
  a4292fbc
24 Nov, 2016 2 commits
- Fixing BIOPET-473 · 90b5c62d
  Peter van 't Hof authored Nov 24, 2016
  
  90b5c62d
- Format fixes · c116ce0a
  Peter van 't Hof authored Nov 24, 2016
  
  c116ce0a
22 Nov, 2016 1 commit
- Added clipping and mapping quality to multisamplemappingreport · 51c319f2
  Peter van 't Hof authored Nov 22, 2016
  
  51c319f2
08 Nov, 2016 1 commit
- Fixed compile issues · a4553c54
  Peter van 't Hof authored Nov 08, 2016
  
  a4553c54
04 Nov, 2016 1 commit
- Add fix for BIOPET-411 · 8cb19f0f
  Peter van 't Hof authored Nov 04, 2016
  
  8cb19f0f
25 Oct, 2016 1 commit
- Fix for BIOPET-395 · 3a1af12e
  Peter van 't Hof authored Oct 25, 2016
  
  3a1af12e
24 Aug, 2016 1 commit
- fixing report · 3a302742
  Peter van 't Hof authored Aug 24, 2016
  
  3a302742
23 Aug, 2016 1 commit
- Removed insertsize plot on single end from report · 0da332ac
  Peter van 't Hof authored Aug 23, 2016
  
  0da332ac
10 Aug, 2016 1 commit
- Fixed type · cdc1f3c6
  Peter van 't Hof authored Aug 10, 2016
  
  cdc1f3c6
09 Aug, 2016 1 commit
- Force no flexiprep in gears · c2fdfed6
  Peter van 't Hof authored Aug 09, 2016
  
  c2fdfed6
02 Jun, 2016 1 commit
- Add hisat2 to mapping · aaf8420b
  bow authored Jun 02, 2016
  
  aaf8420b
31 May, 2016 2 commits
- Fix lowercase · 5665f7e9
  Wai Yi Leung authored May 31, 2016
  
  5665f7e9
- Set default star to output unmapped reads also in the bamfile · cf99b25d
  Wai Yi Leung authored May 31, 2016
  
  cf99b25d
25 May, 2016 1 commit
- change ALL licenses across all files. · 55b1b7dd
  Sander Bollen authored May 25, 2016
  
  55b1b7dd
23 May, 2016 1 commit
- fix #348 · c1f0eacf
  Sander Bollen authored May 23, 2016
  
  c1f0eacf
15 May, 2016 1 commit
- Remove old comment · 03360822
  Peter van 't Hof authored May 15, 2016
  
  03360822