Commits · 361a77718166d7035f614a144d5000b0ebabdf11 · Mirrors / biopet.biopet

19 Apr, 2017 14 commits
- Merge branch 'develop' into fix-heatmap-margins · 361a7771
  Sander Bollen authored Apr 19, 2017
  
  361a7771
- Merge pull request #78 from biopet/fix-BIOPET-368 · b031a6e7
  Peter van 't Hof authored Apr 19, 2017
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Adding gender aware variantcalling for gvcf mode
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  b031a6e7
- Fix compile error · 6132f59d
  Peter van 't Hof authored Apr 19, 2017
  
  6132f59d
- Merge branch 'develop' into fix-BIOPET-368 · dc3a744f
  Peter van 't Hof authored Apr 19, 2017
  
  dc3a744f
- Merge pull request #79 from biopet/fix-BIOPET-656 · 7729de26
  Peter van 't Hof authored Apr 19, 2017
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Adding new option to haplotypecaller
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  7729de26
- Merge pull request #75 from biopet/fix-BIOPET-650 · 5e2ceed3
  Peter van 't Hof authored Apr 19, 2017
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Adding Sambamba as merge step
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  5e2ceed3
- get margins for heatmap from row name length · 037745fe
  Sander Bollen authored Apr 19, 2017
  
  037745fe
- Typo (again) · 20d16fa8
  Peter van 't Hof authored Apr 19, 2017
  
  20d16fa8
- Make common methods for fraction · 162d021a
  Peter van 't Hof authored Apr 19, 2017
  
  162d021a
- Typo · 1b13fd65
  Peter van 't Hof authored Apr 19, 2017
  
  1b13fd65
- Merge remote-tracking branch 'remotes/origin/develop' into fix-BIOPET-368 · 9ff35f97
  Peter van 't Hof authored Apr 19, 2017
  
  9ff35f97
- Merge branch 'develop' into fix-BIOPET-650 · b9cb7c04
  Peter van 't Hof authored Apr 19, 2017
  
  b9cb7c04
- Merge branch 'develop' into fix-BIOPET-656 · e0b92056
  Peter van 't Hof authored Apr 19, 2017
  
  e0b92056
- Merge pull request #55 from biopet/fix-BIOPET-306 · 02292fea
  Peter van 't Hof authored Apr 19, 2017
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Fix biopet 306
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  02292fea
18 Apr, 2017 20 commits
- Merge branch 'develop' into fix-BIOPET-306 · 063083df
  Peter van 't Hof authored Apr 18, 2017
  
  063083df
- Merge branch 'develop' into fix-BIOPET-650 · a12237bd
  Peter van 't Hof authored Apr 18, 2017
  
  a12237bd
- Merge branch 'develop' into fix-BIOPET-368 · 5d13b026
  Peter van 't Hof authored Apr 18, 2017
  
  5d13b026
- Merge branch 'develop' into fix-BIOPET-656 · 2c82f97a
  Peter van 't Hof authored Apr 18, 2017
  
  2c82f97a
- Merge pull request #82 from biopet/Fix-BIOPET-572 · 4fb8a7b6
  Peter van 't Hof authored Apr 18, 2017
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Change default file name from "R1" to "sampleName - libName"
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  4fb8a7b6
- Merge branch 'develop' into Fix-BIOPET-572 · 58d71f66
  Peter van 't Hof authored Apr 18, 2017
  
  58d71f66
- Added docs · b0850a6f
  Peter van 't Hof authored Apr 18, 2017
  
  b0850a6f
- Merge branch 'develop' into fix-BIOPET-368 · f815eb1a
  Peter van 't Hof authored Apr 18, 2017
  
  f815eb1a
- Fixing some comments · c5773845
  Peter van 't Hof authored Apr 18, 2017
  
  c5773845
- - · 2e681cb4
  akaljuvee authored Apr 18, 2017
  
  2e681cb4
- implicit val that is now required after changes with report builing · 32c6bec7
  akaljuvee authored Apr 18, 2017
  
  32c6bec7
- Updated tests to check new filenames · 8106b4a6
  Vorderman authored Apr 18, 2017
  
  8106b4a6
- Merge remote-tracking branch 'origin' into Fix-BIOPET-572 · 9d05586a
  Vorderman authored Apr 18, 2017
  
  9d05586a
- Merge pull request #80 from biopet/fix-BIOPET-657 · 0140969c
  Peter van 't Hof authored Apr 18, 2017
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Make it possible to disable HTML report
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  0140969c
- Style fix · 9dc7cded
  Peter van 't Hof authored Apr 18, 2017
  
  9dc7cded
- Make it possible to disable HTML report · b40b3f8d
  Peter van 't Hof authored Apr 18, 2017
  
  b40b3f8d
- Adding new option to haplotypecaller · f58c2fd3
  Peter van 't Hof authored Apr 18, 2017
  
  f58c2fd3
- Fixing regex · 5fb8f2ca
  Peter van 't Hof authored Apr 18, 2017
  
  5fb8f2ca
- Fixed config values · 1b6fca2c
  Peter van 't Hof authored Apr 18, 2017
  
  1b6fca2c
- Change dependency of jobs · 29b86a46
  Peter van 't Hof authored Apr 18, 2017
  
  29b86a46
17 Apr, 2017 1 commit
- Merge pull request #77 from biopet/revert-69-fix-BIOPET-654 · e66c1eec
  Peter van 't Hof authored Apr 17, 2017
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Revert "Remove default arguments"
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  e66c1eec
16 Apr, 2017 5 commits
- Merge branch 'develop' into fix-BIOPET-368 · 9c66f418
  Peter van 't Hof authored Apr 16, 2017
  
  9c66f418
- Merge branch 'develop' into revert-69-fix-BIOPET-654 · 8ba7938f
  Peter van 't Hof authored Apr 16, 2017
  
  8ba7938f
- Merge branch 'develop' into fix-BIOPET-650 · 690f3465
  Peter van 't Hof authored Apr 16, 2017
  
  690f3465
- Merge pull request #74 from biopet/Fix-BIOPET-653 · 1f2295c2
  Peter van 't Hof authored Apr 16, 2017
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Changed Bwa mem -M flag default to 'false'
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  1f2295c2
- Revert "Remove default arguments" · 0211653b
  Peter van 't Hof authored Apr 16, 2017
  
  0211653b