Commits · 1a7fd7dbdf693dd955ba726a64f9c47a2af04806 · Mirrors / biopet.biopet

27 Jul, 2017 2 commits
- No overwrite of the total.json anymore · 1a7fd7db
  Peter van 't Hof authored Jul 27, 2017
  
  1a7fd7db
- Merge stats.json files · 1efcf0c5
  Peter van 't Hof authored Jul 27, 2017
  
  1efcf0c5
21 Jul, 2017 1 commit
- Fixed path in stats.json · e70a3c2e
  Peter van 't Hof authored Jul 21, 2017
  
  e70a3c2e
19 Jul, 2017 3 commits
- Move contigs stats to spark logic · 73754420
  Peter van 't Hof authored Jul 19, 2017
  
  73754420
- Move methods to stats object · 6bad5603
  Peter van 't Hof authored Jul 19, 2017
  
  6bad5603
- Removed contigs storage in Stats class · b9a359c2
  Peter van 't Hof authored Jul 19, 2017
  
  b9a359c2
18 Jul, 2017 9 commits
- Remove old version and replace by the spark version · 2fd247f5
  Peter van 't Hof authored Jul 18, 2017
  
  2fd247f5
- Adding option to limit number of bins in 1 job · 7d053e65
  Peter van 't Hof authored Jul 18, 2017
  
  7d053e65
- Adding optional properties file for biopet · c5d042c6
  Peter van 't Hof authored Jul 18, 2017
  
  c5d042c6
- Only open file once per method call · 4d76382d
  Peter van 't Hof authored Jul 18, 2017
  
  4d76382d
- Fix compile errors · 3835e14b
  Peter van 't Hof authored Jul 18, 2017
  
  3835e14b
- Remove local jar for testing · 8f9236a6
  Peter van 't Hof authored Jul 18, 2017
  
  8f9236a6
- Switch to output classes for Arg parsing · e82756e6
  Peter van 't Hof authored Jul 18, 2017
  
  e82756e6
- Fix style · 29b937d4
  Peter van 't Hof authored Jul 18, 2017
  
  29b937d4
- Removing out commented code · c1c70187
  Peter van 't Hof authored Jul 18, 2017
  
  c1c70187
17 Jul, 2017 1 commit
- WIP · 08448483
  Peter van 't Hof authored Jul 17, 2017
  
  08448483
16 Jul, 2017 1 commit
- Adding all Jars · 88d51c42
  Peter van 't Hof authored Jul 16, 2017
  
  88d51c42
15 Jul, 2017 3 commits
- Removing some meta files from jar · 2c2e3865
  Peter van 't Hof authored Jul 15, 2017
  
  2c2e3865
- Fixing some compile issues · 38103728
  Peter van 't Hof authored Jul 15, 2017
  
  38103728
- Adding a spark version of vcfstats · 962887bc
  Peter van 't Hof authored Jul 15, 2017
  
  962887bc
14 Jul, 2017 1 commit
- WIP: Spark implementation · 945050cd
  Peter van 't Hof authored Jul 14, 2017
  
  945050cd
13 Jul, 2017 1 commit
- Code warning found biopet tools · 63547f9b
  Peter van 't Hof authored Jul 13, 2017
  
  63547f9b
28 May, 2017 2 commits
- Format fix · 3b139a79
  Peter van 't Hof authored May 28, 2017
  
  3b139a79
- Fixing compile issues · bcc8fb10
  Peter van 't Hof authored May 28, 2017
  
  bcc8fb10
26 Apr, 2017 1 commit
- Formatted scala files with scalafmt · e5bbde4d
  Ruben Vorderman authored Apr 26, 2017
  
  e5bbde4d
25 Apr, 2017 1 commit
- Adding licence · 03e11ce8
  Peter van 't Hof authored Apr 25, 2017
  
  03e11ce8
21 Apr, 2017 1 commit
- one log line · b9173a70
  akaljuvee authored Apr 21, 2017
  
  b9173a70
06 Apr, 2017 1 commit
- parsing vcf files in separate jobs · ad151df9
  akaljuvee authored Apr 06, 2017
  
  ad151df9
07 Mar, 2017 2 commits
- Fixed compile error · bf363cf7
  Peter van 't Hof authored Mar 07, 2017
  
  bf363cf7
- Changed VCFstats to check whether outputDir is a valid directory. · 9ce65deb
  Ruben Vorderman authored Mar 07, 2017
  
  9ce65deb
23 Jan, 2017 1 commit
- Adding licence to code · 2fc77904
  Peter van 't Hof authored Jan 23, 2017
  
  2fc77904
18 Jan, 2017 1 commit
- Format fixes · 3f119436
  Peter van 't Hof authored Jan 18, 2017
  
  3f119436
17 Jan, 2017 2 commits
- Added error message · 3ccef8d1
  Peter van 't Hof authored Jan 17, 2017
  
  3ccef8d1
- Fixing vcfstats · 648ed1f3
  Peter van 't Hof authored Jan 17, 2017
  
  648ed1f3
02 Jan, 2017 1 commit
- Fixed agregated stats · 14dcba60
  Peter van 't Hof authored Jan 02, 2017
  
  14dcba60
24 Dec, 2016 1 commit
- Fixing summary · 5ce12b5f
  Peter van 't Hof authored Dec 24, 2016
  
  5ce12b5f
23 Dec, 2016 2 commits
- Rename · 6ced8ab1
  Peter van 't Hof authored Dec 23, 2016
  
  6ced8ab1
- Replace old files with 1 file · 6fa7f040
  Peter van 't Hof authored Dec 23, 2016
  
  6fa7f040
22 Dec, 2016 2 commits
- Adding methods to agregate stats · 299875bb
  Peter van 't Hof authored Dec 22, 2016
  
  299875bb
- Move method to vcfutils · ef03063d
  Peter van 't Hof authored Dec 22, 2016
  
  ef03063d