Commits · 0e122e1f1de02fd52e92e47729d66b1fc059e9bd · Mirrors / biopet.biopet

12 Apr, 2016 1 commit
- Added docs · 0e122e1f
  Peter van 't Hof authored Apr 12, 2016
  
  0e122e1f
11 Apr, 2016 17 commits
- Added to agregated unit tests coverage · 46df370a
  Peter van 't Hof authored Apr 11, 2016
  
  46df370a
- Fixed ; replacement · 2591ac32
  Peter van 't Hof authored Apr 11, 2016
  
  2591ac32
- Code style fixes · 8b41d86d
  Peter van 't Hof authored Apr 11, 2016
  
  8b41d86d
- Added unit test to SnptestToVcf · 7ed7593c
  Peter van 't Hof authored Apr 11, 2016
  
  7ed7593c
- Added deleteOnExit · dca18c6a
  Peter van 't Hof authored Apr 11, 2016
  
  dca18c6a
- Switch one test to non compressed output · ed78055e
  Peter van 't Hof authored Apr 11, 2016
  
  ed78055e
- Adding test to GensToVcf · 6894dd4d
  Peter van 't Hof authored Apr 11, 2016
  
  6894dd4d
- Remove todo · b6b7d57d
  Peter van 't Hof authored Apr 11, 2016
  
  b6b7d57d
- Fixed remove temp file · 11f17551
  Peter van 't Hof authored Apr 11, 2016
  
  11f17551
- Shielded log output from unit testing · 875489ac
  Peter van 't Hof authored Apr 11, 2016
  
  875489ac
- Fixed name · 40cc1009
  Peter van 't Hof authored Apr 11, 2016
  
  40cc1009
- Merge remote-tracking branch 'remotes/origin/develop' into feature-snp_test · 2651a6d7
  Peter van 't Hof authored Apr 11, 2016
  
  2651a6d7
- Added spec parsing unit test · 51f89433
  Peter van 't Hof authored Apr 11, 2016
  
  51f89433
- Added test from vcf file · 33b1aeb1
  Peter van 't Hof authored Apr 11, 2016
  
  33b1aeb1
- Added empty test · a86f9771
  Peter van 't Hof authored Apr 11, 2016
  
  a86f9771
- Fix code warnings · cfeefcd4
  Peter van 't Hof authored Apr 11, 2016
  
  cfeefcd4
- Added gens_info values · 13825363
  Peter van 't Hof authored Apr 11, 2016
  
  13825363
10 Apr, 2016 1 commit
- Merge branch 'feature-seq_error_test' into 'develop' · 180bb97e
  bow authored Apr 10, 2016
```
Added binominal test

Added this for project 168

See merge request !367
```
  180bb97e
08 Apr, 2016 21 commits
- Merge branch 'feature-confignamespace' into 'develop' · 3637e383
  Peter van 't Hof authored Apr 08, 2016
```
Feature configNamespace

See #163.  

See merge request !348
```
  3637e383
- Remove unused imports · f0e1e14f
  Peter van 't Hof authored Apr 08, 2016
  
  f0e1e14f
- Remove PL · 117c534d
  Peter van 't Hof authored Apr 08, 2016
  
  117c534d
- Change description · 99a7f2e0
  Peter van 't Hof authored Apr 08, 2016
  
  99a7f2e0
- Added error message · e32a9778
  Peter van 't Hof authored Apr 08, 2016
  
  e32a9778
- no more failing tests :-) · 7d00bf07
  Sander Bollen authored Apr 08, 2016
  
  7d00bf07
- Fixed ; in values · 8ad1aa41
  Peter van 't Hof authored Apr 08, 2016
  
  8ad1aa41
- Fixed rsid · b7bf9221
  Peter van 't Hof authored Apr 08, 2016
  
  b7bf9221
- well.. it compiles · 6e5f1478
  Sander Bollen authored Apr 08, 2016
  
  6e5f1478
- Merge branch 'develop' into feature-confignamespace · c2e8dbba
  Sander Bollen authored Apr 08, 2016
```
Conflicts:
	public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/Fastqc.scala
```
  c2e8dbba
- Added a default for snptest · 318fafaa
  Peter van 't Hof authored Apr 08, 2016
  
  318fafaa
- Fixed bed dir · 62aa5420
  Peter van 't Hof authored Apr 08, 2016
  
  62aa5420
- Fixed bed dir · 5301e77b
  Peter van 't Hof authored Apr 08, 2016
  
  5301e77b
- Added job delay · 97ffa0de
  Peter van 't Hof authored Apr 08, 2016
  
  97ffa0de
- Format · 72bc5c67
  Peter van 't Hof authored Apr 08, 2016
  
  72bc5c67
- Fix command · 69e6a2cd
  Peter van 't Hof authored Apr 08, 2016
  
  69e6a2cd
- Switch to other dir for bed files · a49982ef
  Peter van 't Hof authored Apr 08, 2016
  
  a49982ef
- Write empty file when no records exist · 51468763
  Peter van 't Hof authored Apr 08, 2016
  
  51468763
- Fixed defaults · a081627f
  Peter van 't Hof authored Apr 08, 2016
  
  a081627f
- Added contig · ea7bdf42
  Peter van 't Hof authored Apr 08, 2016
  
  ea7bdf42
- Adding snptestToVcf to pipeline · cfcb5527
  Peter van 't Hof authored Apr 08, 2016
  
  cfcb5527