Commit fe542841 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Style fixes

parent 7cca44be
......@@ -15,7 +15,6 @@ class UnifiedGenotyper(val root: Configurable) extends org.broadinstitute.gatk.q
@Output(required = false)
protected var vcfIndex: File = _
if (config.contains("scattercount")) scatterCount = config("scattercount")
if (config.contains("dbsnp")) this.dbsnp = config("dbsnp")
sample_ploidy = config("ploidy")
......
......@@ -133,7 +133,7 @@ class QcCommand(val root: Configurable, val fastqc: Fastqc) extends BiopetComman
outputCommand match {
case gzip: Gzip => outputFile :<: gzip
case cat: Cat => cat.input = outputFile :: Nil
case cat: Cat => cat.input = outputFile :: Nil
}
seqtk.beforeGraph()
......
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