From fabd42e8cf32f6a5da59a23f3140a8e6286b201f Mon Sep 17 00:00:00 2001
From: Sander Bollen <a.h.b.bollen@lumc.nl>
Date: Fri, 10 Apr 2015 11:17:20 +0200
Subject: [PATCH] adding Test decorators
---
.../scala/nl/lumc/sasc/biopet/tools/VcfWithVcfTest.scala | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/public/biopet-framework/src/test/scala/nl/lumc/sasc/biopet/tools/VcfWithVcfTest.scala b/public/biopet-framework/src/test/scala/nl/lumc/sasc/biopet/tools/VcfWithVcfTest.scala
index 395275318..b2fbcfbb5 100644
--- a/public/biopet-framework/src/test/scala/nl/lumc/sasc/biopet/tools/VcfWithVcfTest.scala
+++ b/public/biopet-framework/src/test/scala/nl/lumc/sasc/biopet/tools/VcfWithVcfTest.scala
@@ -2,6 +2,7 @@ package nl.lumc.sasc.biopet.tools
import java.nio.file.Paths
+import org.testng.annotations.Test
import org.scalatest.Matchers
import org.scalatest.mock.MockitoSugar
import org.scalatest.testng.TestNGSuite
@@ -22,19 +23,19 @@ class VcfWithVcfTest extends TestNGSuite with MockitoSugar with Matchers {
val unvepped_path = resourcePath("/unvepped.vcf")
val rand = new Random()
- def testOutputTypeVcf() = {
+ @Test def testOutputTypeVcf() = {
val tmp_path = "/tmp_VcfWithVcf_" + rand.nextString(10) + ".vcf"
val arguments = Array("-I", unvepped_path, "-S", vepped_path, "-O", tmp_path, "-f", "CSQ")
main(arguments)
}
- def testOutputTypeVcfGz() = {
+ @Test def testOutputTypeVcfGz() = {
val tmp_path = "/tmp_VcfWithVcf_" + rand.nextString(10) + ".vcf.gz"
val arguments = Array("-I", unvepped_path, "-S", vepped_path, "-O", tmp_path, "-f", "CSQ")
main(arguments)
}
- def testOutputTypeBcf() = {
+ @Test def testOutputTypeBcf() = {
val tmp_path = "/tmp_VcfWithVcf_" + rand.nextString(10) + ".bcf"
val arguments = Array("-I", unvepped_path, "-S", vepped_path, "-O", tmp_path, "-f", "CSQ")
main(arguments)
--
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