From f9b25fde15d8d043dd30be25cd3b3bf53b4e7f0d Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Wed, 25 Jan 2017 13:09:13 +0100
Subject: [PATCH] Adding centrifuge to summary

---
 .../nl/lumc/sasc/biopet/pipelines/gears/GearsCentrifuge.scala    | 1 +
 1 file changed, 1 insertion(+)

diff --git a/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/GearsCentrifuge.scala b/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/GearsCentrifuge.scala
index 576f5c425..9d7397c51 100644
--- a/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/GearsCentrifuge.scala
+++ b/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/GearsCentrifuge.scala
@@ -38,6 +38,7 @@ class GearsCentrifuge(val root: Configurable) extends QScript with SummaryQScrip
     val centrifugeCmd = centrifuge | new Gzip(this) > centrifugeOutput
     centrifugeCmd.threadsCorrection = -1
     add(centrifugeCmd)
+    addSummarizable(centrifuge, "centrifuge")
 
     makeKreport("centrifuge", unique = false)
     makeKreport("centrifuge_unique", unique = true)
-- 
GitLab