Commit f249177a authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Moved report to a trait so it can be extended by magpie2

parent 8eb7deef
......@@ -32,7 +32,10 @@ class ShivaReport(val root: Configurable) extends ReportBuilderExtension {
/** Object for report generation for Shiva pipeline */
object ShivaReport extends MultisampleMappingReportTrait {
object ShivaReport extends ShivaReportTrait
/** Trait for report generation for Shiva pipeline, this can be extended */
trait ShivaReportTrait extends MultisampleMappingReportTrait {
def variantcallingExecuted = summary.getValue("shiva", "settings", "multisample_variantcalling") match {
case Some(true) => true
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