Commit edb1d196 authored by pjvan_thof's avatar pjvan_thof
Browse files

Merge remote-tracking branch 'remotes/origin/develop' into fix-BIOPET-492

parents b599f274 d8f47fa1
......@@ -54,6 +54,9 @@ class Carp(val parent: Configurable) extends QScript with MultisampleMappingTrai
override def makeSample(id: String) = new Sample(id)
class Sample(sampleId: String) extends super.Sample(sampleId) {
override def bamFile: Option[File] =
if (libraries.size == 1) libraries.head._2.mapping.map(_.finalBamFile) else super.bamFile
override def preProcessBam = Some(createFile("filter.bam"))
override def metricsPreprogressBam = false
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment