diff --git a/public/flexiprep/src/main/resources/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepFastQcPlot.ssp b/public/flexiprep/src/main/resources/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepFastQcPlot.ssp index cd67a357fb3fa72e3ff785c32825efd181e265ed..f8dd3e533d3ff2eacb2420af05efeee136acf090 100644 --- a/public/flexiprep/src/main/resources/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepFastQcPlot.ssp +++ b/public/flexiprep/src/main/resources/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepFastQcPlot.ssp @@ -24,10 +24,7 @@ } def plotAvailable(read:String) = { - summary.getLibraryValue(sampleId.get, libId.get, "flexiprep", "files", read, plot, "md5").collect { - case md5 if md5 != "error_on_capture" => true - case otherwise => false - }.getOrElse(false) + new File(summary.getLibraryValue(sampleId.get, libId.get, "flexiprep", "files", read, plot, "path").get.toString).exists() } }#