Commit e37f8612 authored by akaljuvee's avatar akaljuvee

one log line

parent af8a8b8d
......@@ -105,7 +105,7 @@ trait BiopetQScript extends Configurable with GatkLogging { qscript: QScript =>
case _ =>
}
count += 1
if (count % 500 == 0) logger.info(s"Preprocessing done for ${count} jobs")
if (count % 500 == 0) logger.info(s"Preprocessing done for ${count} jobs out of ${functions.length} total")
}
val logDir = new File(outputDir, ".log" + File.separator + qSettings.runName.toLowerCase)
......
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