Change filenames to proper camelCase

public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VCFWithVCF.scala → public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VcfWithVcf.scala

@@ -13,7 +13,7 @@ import scala.collection.immutable
 /**
  * Created by ahbbollen on 11-2-15.
  */
-object VCFWithVCF extends ToolCommand {
+object VcfWithVcf extends ToolCommand {
   case class Fields(inputField: String, outputField: String)
 
   case class Args(inputFile: File = null,

public/biopet-public-package/src/main/scala/nl/lumc/sasc/biopet/core/BiopetExecutablePublic.scala

@@ -59,5 +59,5 @@ object BiopetExecutablePublic extends BiopetExecutable {
     nl.lumc.sasc.biopet.tools.Seqstat,
     nl.lumc.sasc.biopet.tools.VEPNormalizer,
     nl.lumc.sasc.biopet.tools.AnnotateVcfWithBed,
-    nl.lumc.sasc.biopet.tools.VCFWithVCF)
+    nl.lumc.sasc.biopet.tools.VcfWithVcf)
 }