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Commit def28b47 authored by Peter van 't Hof's avatar Peter van 't Hof
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Fix on exe

parent 956f1d84
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protected/biopet-protected-package/src/main/scala/nl/lumc/sasc/biopet/core/BiopetExecutableProtected.scala
View file @ def28b47
package nl.lumc.sasc.biopet.core
object BiopetExecutableProtected extends BiopetExecutable {
val pipelines: List[MainCommand] = List(
lazy val pipelines: List[MainCommand] = List(
nl.lumc.sasc.biopet.pipelines.flexiprep.Flexiprep,
nl.lumc.sasc.biopet.pipelines.mapping.Mapping,
nl.lumc.sasc.biopet.pipelines.gentrap.Gentrap,
......@@ -16,7 +16,7 @@ object BiopetExecutableProtected extends BiopetExecutable {
nl.lumc.sasc.biopet.pipelines.basty.Basty,
nl.lumc.sasc.biopet.pipelines.yamsvp.Yamsvp)
val tools: List[MainCommand] = List(
lazy val tools: List[MainCommand] = List(
nl.lumc.sasc.biopet.tools.WipeReads,
nl.lumc.sasc.biopet.tools.ExtractAlignedFastq,
nl.lumc.sasc.biopet.tools.BiopetFlagstat,
......
public/biopet-public-package/src/main/scala/nl/lumc/sasc/biopet/core/BiopetExecutablePublic.scala
View file @ def28b47
package nl.lumc.sasc.biopet.core
object BiopetExecutablePublic extends BiopetExecutable {
val pipelines: List[MainCommand] = List(
lazy val pipelines: List[MainCommand] = List(
nl.lumc.sasc.biopet.pipelines.flexiprep.Flexiprep,
nl.lumc.sasc.biopet.pipelines.mapping.Mapping,
nl.lumc.sasc.biopet.pipelines.gentrap.Gentrap,
......@@ -9,7 +9,7 @@ object BiopetExecutablePublic extends BiopetExecutable {
nl.lumc.sasc.biopet.pipelines.sage.Sage,
nl.lumc.sasc.biopet.pipelines.yamsvp.Yamsvp)
val tools: List[MainCommand] = List(
lazy val tools: List[MainCommand] = List(
nl.lumc.sasc.biopet.tools.WipeReads,
nl.lumc.sasc.biopet.tools.ExtractAlignedFastq,
nl.lumc.sasc.biopet.tools.BiopetFlagstat,
......
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