Commit dcbe1c50 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Remove commented lines

parent bd3ce3ae
......@@ -10,7 +10,7 @@ class HaplotypeCaller(val root: Configurable) extends org.broadinstitute.gatk.qu
min_mapping_quality_score = config("minMappingQualityScore", default = 20)
if (config.contains("scattercount")) scatterCount = config("scattercount")
if (config.contains("dbsnp")) this.dbsnp = config("dbsnp")
if (config.contains("ploidy")) this.sample_ploidy = config("ploidy")
this.sample_ploidy = config("ploidy")
nct = config("threads", default = 3)
bamOutput = config("bamOutput")
memoryLimit = Option(nct.getOrElse(1) * 2)
......
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