diff --git a/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala b/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala index 30d1546691e7562de417e8024b9ad6fdf99b4d0c..34a43484056b82d9948a11c16f7c2276be7bd6e8 100644 --- a/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala +++ b/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala @@ -70,7 +70,7 @@ abstract class GentrapTestAbstract(val expressionMeasure: String) extends TestNG .toMap ) - val validExpressionMeasures = Set( + val validExpressionMeasures = Set( "fragments_per_gene", "fragments_per_exon", "bases_per_gene", "bases_per_exon", "cufflinks_strict", "cufflinks_guided", "cufflinks_blind") diff --git a/public/mapping/src/test/scala/nl/lumc/sasc/biopet/pipelines/mapping/MappingTest.scala b/public/mapping/src/test/scala/nl/lumc/sasc/biopet/pipelines/mapping/MappingTest.scala index c9a601acfb5d7994a0e1ea48b3485972403476f3..377c771cee17b62922381cd09d9c4ebd0aa15aec 100644 --- a/public/mapping/src/test/scala/nl/lumc/sasc/biopet/pipelines/mapping/MappingTest.scala +++ b/public/mapping/src/test/scala/nl/lumc/sasc/biopet/pipelines/mapping/MappingTest.scala @@ -15,7 +15,7 @@ */ package nl.lumc.sasc.biopet.pipelines.mapping -import java.io.{File, FileOutputStream} +import java.io.{ File, FileOutputStream } import com.google.common.io.Files import nl.lumc.sasc.biopet.pipelines.flexiprep.Fastqc @@ -25,7 +25,7 @@ import org.apache.commons.io.FileUtils import org.broadinstitute.gatk.queue.QSettings import org.scalatest.Matchers import org.scalatest.testng.TestNGSuite -import org.testng.annotations.{AfterClass, DataProvider, Test} +import org.testng.annotations.{ AfterClass, DataProvider, Test } /** * Test class for [[Mapping]] diff --git a/public/pom.xml b/public/pom.xml index d1ac6e032625dff580e5ada2d4fd3bc04c04e40f..0f2785691ad8dab0d8111a6204894b8801e4eeac 100644 --- a/public/pom.xml +++ b/public/pom.xml @@ -80,6 +80,7 @@ <version>2.18.1</version> <configuration> <forkCount>1C</forkCount> + <argLine>-Xmx300m</argLine> <workingDirectory>${project.build.directory}</workingDirectory> </configuration> </plugin>