Commit cd66d051 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix deps for prefix Job

parent d1991c9e
......@@ -89,6 +89,7 @@ class Sage(val root: Configurable) extends QScript with MultiSampleQScript {
val flexiprepOutput = for ((key,file) <- flexiprep.outputFiles if key.endsWith("output_R1")) yield file
val prefixFastq = PrefixFastq.apply(this, flexiprepOutput.head, runDir)
prefixFastq.prefix = config("sage_tag", default = "CATG")
prefixFastq.deps +:= flexiprep.outputFiles("fastq_input_R1")
add(prefixFastq)
outputFiles += ("prefix_fastq" -> prefixFastq.output)
......
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