Commit c8ffb442 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix on option on picard

parent bbe9311d
......@@ -14,10 +14,10 @@ trait Picard extends BiopetJavaCommandLineFunction {
var stringency: String = config("validationstringency", submodule = "picard")
@Argument(doc = "COMPRESSION_LEVEL", required = false)
var compression: Int = config("compressionlevel", submodule = "picard")
var compression: Option[Int] = config("compressionlevel", submodule = "picard")
@Argument(doc = "MAX_RECORDS_IN_RAM", required = false)
var maxRecordsInRam: Int = config("maxrecordsinram", submodule = "picard")
var maxRecordsInRam: Option[Int] = config("maxrecordsinram", submodule = "picard")
@Argument(doc = "CREATE_INDEX", required = false)
var createIndex: Boolean = config("createindex", default = true, submodule = "picard")
......
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