Commit c6f4c405 authored by bow's avatar bow
Browse files

Merge branch 'feature-licence' into 'develop'

Feature licence

Switch so separated poms because of license issue

See merge request !58
parents f12c5edf 44bf4593
......@@ -13,5 +13,8 @@ if [ ! $1 ] ; then
exit 1
fi
mvn -f $DIR/pom.xml versions:set -DnewVersion=$1 -DgenerateBackupPoms=false
mvn -f $DIR/biopet-framework/pom.xml versions:set -DnewVersion=$1 -DgenerateBackupPoms=false
for POM in `find $DIR -name "pom.xml"`
do
mvn -f $POM versions:set -DnewVersion=$1 -DgenerateBackupPoms=false
done
JAR=/data/DIV5/SASC/common/programs/Queue-3.3-0/Queue.jar
ID=gatk-queue-package-distribution
VERSION=3.3
GROUP=org.broadinstitute.gatk
mvn install:install-file -Dfile=$JAR -DgroupId=$GROUP -DartifactId=$ID -Dversion=$VERSION -Dpackaging=jar
......@@ -2,12 +2,19 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>nl.lumc.sasc</groupId>
<artifactId>Biopet</artifactId>
<version>0.2.0-DEV</version>
<artifactId>BiopetRoot</artifactId>
<packaging>pom</packaging>
<name>Biopet</name>
<name>BiopetRoot</name>
<parent>
<groupId>nl.lumc.sasc</groupId>
<artifactId>Biopet</artifactId>
<version>0.2.0-DEV</version>
<relativePath>public</relativePath>
</parent>
<modules>
<module>biopet-framework</module>
<module>public</module>
<module>protected</module>
</modules>
</project>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>nl.lumc.sasc</groupId>
<artifactId>Basty</artifactId>
<packaging>jar</packaging>
<parent>
<groupId>nl.lumc.sasc</groupId>
<artifactId>BiopetGatk</artifactId>
<version>0.2.0-DEV</version>
<relativePath>../</relativePath>
</parent>
<inceptionYear>2014</inceptionYear>
<name>Basty</name>
<dependencies>
<dependency>
<groupId>nl.lumc.sasc</groupId>
<artifactId>BiopetFramework</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>nl.lumc.sasc</groupId>
<artifactId>BiopetGatkPipelines</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>nl.lumc.sasc</groupId>
<artifactId>Mapping</artifactId>
<version>${project.version}</version>
</dependency>
</dependencies>
</project>
/target/
\ No newline at end of file
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>nl.lumc.sasc</groupId>
<artifactId>BiopetGatkExtensions</artifactId>
<packaging>jar</packaging>
<parent>
<groupId>nl.lumc.sasc</groupId>
<artifactId>BiopetGatk</artifactId>
<version>0.2.0-DEV</version>
<relativePath>../</relativePath>
</parent>
<inceptionYear>2014</inceptionYear>
<name>BiopetGatkExtensions</name>
<dependencies>
<dependency>
<groupId>nl.lumc.sasc</groupId>
<artifactId>BiopetFramework</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>org.broadinstitute.gatk</groupId>
<artifactId>gatk-queue-extensions-distribution</artifactId>
<version>3.3</version>
</dependency>
</dependencies>
</project>
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