Commit c4bab449 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

style change

parent 7aace72b
...@@ -120,7 +120,7 @@ trait BiopetQScript extends Configurable with GatkLogging { qscript: QScript => ...@@ -120,7 +120,7 @@ trait BiopetQScript extends Configurable with GatkLogging { qscript: QScript =>
val className = if (f.getClass.isAnonymousClass) f.getClass.getSuperclass.getSimpleName else f.getClass.getSimpleName val className = if (f.getClass.isAnonymousClass) f.getClass.getSuperclass.getSimpleName else f.getClass.getSimpleName
BiopetQScript.safeOutputs(f) match { BiopetQScript.safeOutputs(f) match {
case Some(o) => f.jobOutputFile = new File(o.head.getAbsoluteFile.getParent, "." + f.firstOutput.getName + "." + className + ".out") case Some(o) => f.jobOutputFile = new File(o.head.getAbsoluteFile.getParent, "." + f.firstOutput.getName + "." + className + ".out")
case _ => f.jobOutputFile = new File("./stdout") // Line is here for test backup case _ => f.jobOutputFile = new File("./stdout") // Line is here for test backup
} }
}) })
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment