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biopet.biopet
Commits
c4bab449
Commit
c4bab449
authored
Jan 24, 2017
by
Peter van 't Hof
Browse files
style change
parent
7aace72b
Changes
1
Hide whitespace changes
Inline
Side-by-side
biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/BiopetQScript.scala
View file @
c4bab449
...
@@ -120,7 +120,7 @@ trait BiopetQScript extends Configurable with GatkLogging { qscript: QScript =>
...
@@ -120,7 +120,7 @@ trait BiopetQScript extends Configurable with GatkLogging { qscript: QScript =>
val
className
=
if
(
f
.
getClass
.
isAnonymousClass
)
f
.
getClass
.
getSuperclass
.
getSimpleName
else
f
.
getClass
.
getSimpleName
val
className
=
if
(
f
.
getClass
.
isAnonymousClass
)
f
.
getClass
.
getSuperclass
.
getSimpleName
else
f
.
getClass
.
getSimpleName
BiopetQScript
.
safeOutputs
(
f
)
match
{
BiopetQScript
.
safeOutputs
(
f
)
match
{
case
Some
(
o
)
=>
f
.
jobOutputFile
=
new
File
(
o
.
head
.
getAbsoluteFile
.
getParent
,
"."
+
f
.
firstOutput
.
getName
+
"."
+
className
+
".out"
)
case
Some
(
o
)
=>
f
.
jobOutputFile
=
new
File
(
o
.
head
.
getAbsoluteFile
.
getParent
,
"."
+
f
.
firstOutput
.
getName
+
"."
+
className
+
".out"
)
case
_
=>
f
.
jobOutputFile
=
new
File
(
"./stdout"
)
// Line is here for test backup
case
_
=>
f
.
jobOutputFile
=
new
File
(
"./stdout"
)
// Line is here for test backup
}
}
})
})
...
...
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