diff --git a/public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/WriteDependencies.scala b/public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/WriteDependencies.scala index 232954b7d8be7bf99cd4b354fb72d570ed1ebddc..108ee694e54fc4dd126dfc82f90adb7470602cde 100644 --- a/public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/WriteDependencies.scala +++ b/public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/WriteDependencies.scala @@ -80,7 +80,7 @@ object WriteDependencies extends Logging with Configurable { "intermediate" -> isIntermediate, "output_jobs" -> outputJobNames, "input_jobs" -> inputJobNames, - "exist_at_start" -> fileExist, + "exists_at_start" -> fileExist, "pipeline_input" -> outputJobs.isEmpty ) } @@ -114,9 +114,9 @@ object WriteDependencies extends Logging with Configurable { case cmd: CommandLineFunction => cmd.commandLine case _ => None }), "intermediate" -> f.isIntermediate, - "depens_on_intermediate" -> f.inputs.exists(files(_).isIntermediate), - "depens_on_jobs" -> f.inputs.toList.flatMap(files(_).outputJobNames).distinct, - "ouput_used_by_jobs" -> outputFiles(f).toList.flatMap(files(_).inputJobNames).distinct, + "depends_on_intermediate" -> f.inputs.exists(files(_).isIntermediate), + "depends_on_jobs" -> f.inputs.toList.flatMap(files(_).outputJobNames).distinct, + "output_used_by_jobs" -> outputFiles(f).toList.flatMap(files(_).inputJobNames).distinct, "outputs" -> outputFiles(f).toList, "inputs" -> f.inputs.toList, "done_at_start" -> f.isDone,