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biopet.biopet
Commits
beeb89dc
Commit
beeb89dc
authored
Apr 13, 2017
by
Peter van 't Hof
Browse files
Style fixes
parent
de3e8ea9
Changes
1
Hide whitespace changes
Inline
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shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/Shiva.scala
View file @
beeb89dc
...
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@@ -16,13 +16,13 @@ package nl.lumc.sasc.biopet.pipelines.shiva
import
java.io.File
import
nl.lumc.sasc.biopet.core.
{
PipelineCommand
,
Reference
}
import
nl.lumc.sasc.biopet.core.
{
PipelineCommand
,
Reference
}
import
nl.lumc.sasc.biopet.core.report.ReportBuilderExtension
import
nl.lumc.sasc.biopet.extensions.gatk._
import
nl.lumc.sasc.biopet.extensions.tools.ValidateVcf
import
nl.lumc.sasc.biopet.pipelines.bammetrics.TargetRegions
import
nl.lumc.sasc.biopet.pipelines.kopisu.Kopisu
import
nl.lumc.sasc.biopet.pipelines.mapping.
{
Mapping
,
MultisampleMappingTrait
}
import
nl.lumc.sasc.biopet.pipelines.mapping.
{
Mapping
,
MultisampleMappingTrait
}
import
nl.lumc.sasc.biopet.pipelines.toucan.Toucan
import
nl.lumc.sasc.biopet.utils.config.Configurable
import
org.broadinstitute.gatk.queue.QScript
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