Commit be731b74 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Added front

parent b0f9d027
<%@ var summary: Summary %>
<%@ var rootPath: String %>
<table class="table">
<tr><th>Version</th><td>${summary.getValue("meta", "pipeline_version")}</td></tr>
<tr><th>Last commit hash</th><td>${summary.getValue("meta", "last_commit_hash")}</td></tr>
<tr><th>Output directory</th><td>${summary.getValue("meta", "output_dir")}</td></tr>
<tr><th>Reference</th><td>${summary.getValue("shiva", "settings", "reference", "species")} - ${summary.getValue("shiva", "settings", "reference", "name")}</td></tr>
<tr><th>Number of samples</th><td>${summary.samples.size}</td></tr>
<div class="row">
<div class="col-md-1"></div>
<div class="col-md-6">
In this web document you can find your <em>Shiva</em> pipeline report.
Different categories of data can be found in the left-side menu.
Statistics per sample and library can be accessed through the top-level menu.
Some statistics for target regions can be found in the regions tab.
Futhermore, you can view all versions of software tools used by selecting <em>Versions</em> from the top menu.
<small>Brought to you by <a href="" target="_blank"><abbr
title="Sequence Analysis Support Core">SASC</abbr></a> and <a
href="" target="_blank"><abbr title="Clinical Genetics LUMC">KG</abbr></a>,
\ No newline at end of file
......@@ -18,9 +18,8 @@ object MultisampleMappingReport extends MultisampleMappingReportTrait {
trait MultisampleMappingReportTrait extends MultisampleReportBuilder {
//TODO: add front section
/** Front section for the report */
def frontSection: ReportSection = ???
def frontSection: ReportSection = ReportSection("/nl/lumc/sasc/biopet/pipelines/mapping/multisampleMappingFront.ssp")
/** Root page for the carp report */
def indexPage = {
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