Commit be27ea6a authored by Peter van 't Hof's avatar Peter van 't Hof

let's test fail on format/git issues

parent dbbe4fba
......@@ -21,6 +21,10 @@ node('local') {
junit '*/target/surefire-reports/*.xml'
}
stage('Check git on changes') {
sh 'if [ $(git diff | wc -l) -eq 0 ]; then true; else echo "[ERROR] Git is not clean anymore after build"; false; fi'
}
stage('Check Documentation') {
sh 'mkdocs build --clean --strict'
}
......
......@@ -30,7 +30,7 @@ class Flexiprep(val root: Configurable) extends QScript with SummaryQScript with
var inputR1: File = _
@Input(doc = "R2 fastq file (gzipped allowed)", shortName = "R2", fullName = "inputR2", required = false)
var inputR2: Option[File] = None
var inputR2: Option[File] = None
/** Skip Trim fastq files */
var skipTrim: Boolean = config("skip_trim", default = false)
......
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