From be1acd390206ea03ff33a26c070af7eaa11cde60 Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Wed, 11 Feb 2015 15:32:07 +0100
Subject: [PATCH] Simplify sorting
---
.../main/scala/nl/lumc/sasc/biopet/core/BiopetQScript.scala | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetQScript.scala b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetQScript.scala
index 13dd46954..9dd433ab5 100644
--- a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetQScript.scala
+++ b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetQScript.scala
@@ -102,8 +102,7 @@ object BiopetQScript extends Logging {
logger.debug(e.getStackTrace.mkString("Stack trace:\n", "\n", "\n"))
}
} else {
- val set = errors.map(_.getMessage).toSet
- set.toList.sorted.foreach(logger.error(_))
+ errors.map(_.getMessage).sorted.distinct.foreach(logger.error(_))
}
throw new IllegalStateException("Biopet found errors")
}
--
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