varsd_cutoff:Option[Int]=config("sd_cutoff",default=4)// Cutoff in unit of standard deviation [4]
// we set this to a higher number to avoid biases in small numbers in sorted bams
varmin_observations:Option[Int]=config("min_observations",default=10000)// Number of observation required to estimate mean and s.d. insert size [10_000]
varcoefvar_cutoff:Option[Int]=config("coef_cutoff",default=1)// Cutoff on coefficients of variation [1]
varhistogram_bins:Option[Int]=config("histogram_bins",default=50)// Number of bins in the histogram [50]
varsd_cutoff:Option[Int]=config("sd_cutoff",default=4)// Cutoff in unit of standard deviation [4]
// we set this to a higher number to avoid biases in small numbers in sorted bams
varmin_observations:Option[Int]=config("min_observations",default=10000)// Number of observation required to estimate mean and s.d. insert size [10_000]
varcoefvar_cutoff:Option[Int]=config("coef_cutoff",default=1)// Cutoff on coefficients of variation [1]
varhistogram_bins:Option[Int]=config("histogram_bins",default=50)// Number of bins in the histogram [50]