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biopet.biopet
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b0e3e032
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b0e3e032
authored
Jul 18, 2017
by
Peter van 't Hof
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docs/pipelines/multisample/shiva.md
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b0e3e032
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@@ -103,9 +103,9 @@ At this moment the following variant callers can be used
| varscan_cns_singlesample |
<a
href=
"http://varscan.sourceforge.net/"
>
varscan
</a>
| |
| raw |
[
Naive variant caller
](
../../tools/MpileupToVcf
)
| |
###### Config tumor-normal pairs
###### Config
for
tumor-normal pairs
To define the tumor-normal pairs the config can look like this:
To define the tumor-normal pairs
,
the config can look like this:
```
yaml
samples
:
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