Commit af0d5e67 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Remove unused imports

parent face5d0e
...@@ -14,12 +14,11 @@ ...@@ -14,12 +14,11 @@
*/ */
package nl.lumc.sasc.biopet.pipelines.mapping package nl.lumc.sasc.biopet.pipelines.mapping
import java.io.{File, FileOutputStream} import java.io.{ File, FileOutputStream }
import com.google.common.io.Files import com.google.common.io.Files
import nl.lumc.sasc.biopet.core.BiopetPipe import nl.lumc.sasc.biopet.core.BiopetPipe
import nl.lumc.sasc.biopet.extensions.centrifuge.Centrifuge import nl.lumc.sasc.biopet.extensions.centrifuge.Centrifuge
import nl.lumc.sasc.biopet.extensions.kraken.Kraken
import nl.lumc.sasc.biopet.pipelines.flexiprep.Fastqc import nl.lumc.sasc.biopet.pipelines.flexiprep.Fastqc
import nl.lumc.sasc.biopet.utils.ConfigUtils import nl.lumc.sasc.biopet.utils.ConfigUtils
import nl.lumc.sasc.biopet.utils.config.Config import nl.lumc.sasc.biopet.utils.config.Config
...@@ -27,7 +26,7 @@ import org.apache.commons.io.FileUtils ...@@ -27,7 +26,7 @@ import org.apache.commons.io.FileUtils
import org.broadinstitute.gatk.queue.QSettings import org.broadinstitute.gatk.queue.QSettings
import org.scalatest.Matchers import org.scalatest.Matchers
import org.scalatest.testng.TestNGSuite import org.scalatest.testng.TestNGSuite
import org.testng.annotations.{AfterClass, BeforeClass, DataProvider, Test} import org.testng.annotations.{ AfterClass, BeforeClass, DataProvider, Test }
/** /**
* Test class for [[Mapping]] * Test class for [[Mapping]]
......
...@@ -19,14 +19,13 @@ import java.io.{File, FileOutputStream} ...@@ -19,14 +19,13 @@ import java.io.{File, FileOutputStream}
import com.google.common.io.Files import com.google.common.io.Files
import nl.lumc.sasc.biopet.core.BiopetPipe import nl.lumc.sasc.biopet.core.BiopetPipe
import nl.lumc.sasc.biopet.extensions.centrifuge.Centrifuge import nl.lumc.sasc.biopet.extensions.centrifuge.Centrifuge
import nl.lumc.sasc.biopet.extensions.kraken.Kraken import nl.lumc.sasc.biopet.extensions.picard.{ MarkDuplicates, MergeSamFiles }
import nl.lumc.sasc.biopet.extensions.picard.{MarkDuplicates, MergeSamFiles}
import nl.lumc.sasc.biopet.utils.{ConfigUtils, Logging} import nl.lumc.sasc.biopet.utils.{ConfigUtils, Logging}
import nl.lumc.sasc.biopet.utils.config.Config import nl.lumc.sasc.biopet.utils.config.Config
import org.broadinstitute.gatk.queue.QSettings import org.broadinstitute.gatk.queue.QSettings
import org.scalatest.Matchers import org.scalatest.Matchers
import org.scalatest.testng.TestNGSuite import org.scalatest.testng.TestNGSuite
import org.testng.annotations.{DataProvider, Test} import org.testng.annotations.{ DataProvider, Test }
/** /**
* Created by pjvanthof on 15/05/16. * Created by pjvanthof on 15/05/16.
......
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