From ae0dbeafb4df7a73a3c657259956fe178c114206 Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Tue, 21 Mar 2017 11:20:46 +0100
Subject: [PATCH] Trying to fix with of alignmentSummaryPlot

---
 .../sasc/biopet/pipelines/bammetrics/BammetricsReport.scala   | 4 +---
 1 file changed, 1 insertion(+), 3 deletions(-)

diff --git a/bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BammetricsReport.scala b/bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BammetricsReport.scala
index 2d57163ee..bc39ca4e3 100644
--- a/bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BammetricsReport.scala
+++ b/bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BammetricsReport.scala
@@ -162,9 +162,7 @@ object BammetricsReport extends ReportBuilder {
     plot.input = tsvFile
     plot.output = pngFile
     plot.ylabel = Some("Reads")
-    if (libraryLevel) {
-      plot.width = Some(200 + (libraries.filter(s => sampleId.getOrElse(s.id) == s.id).size) * 10)
-    } else plot.width = Some(200 + (samples.count(s => sampleId.getOrElse(s) == s) * 10))
+    plot.width = Some(200 + (results.size * 10))
     plot.title = Some("Aligned reads")
     plot.runLocal()
   }
-- 
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