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biopet.biopet
Commits
ae0dbeaf
Commit
ae0dbeaf
authored
Mar 21, 2017
by
Peter van 't Hof
Browse files
Trying to fix with of alignmentSummaryPlot
parent
29889e24
Changes
1
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Inline
Side-by-side
bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BammetricsReport.scala
View file @
ae0dbeaf
...
...
@@ -162,9 +162,7 @@ object BammetricsReport extends ReportBuilder {
plot
.
input
=
tsvFile
plot
.
output
=
pngFile
plot
.
ylabel
=
Some
(
"Reads"
)
if
(
libraryLevel
)
{
plot
.
width
=
Some
(
200
+
(
libraries
.
filter
(
s
=>
sampleId
.
getOrElse
(
s
.
id
)
==
s
.
id
).
size
)
*
10
)
}
else
plot
.
width
=
Some
(
200
+
(
samples
.
count
(
s
=>
sampleId
.
getOrElse
(
s
)
==
s
)
*
10
))
plot
.
width
=
Some
(
200
+
(
results
.
size
*
10
))
plot
.
title
=
Some
(
"Aligned reads"
)
plot
.
runLocal
()
}
...
...
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