Commit ac389d5d authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Merge branch 'fix-bammetrics_summary_switchup' into 'develop'

Fix wrong metrics addition in BamMetrics

The CollectHsMetrics was incorrectly added as the CollectTargetedPcrMetrics. This commit fixes it.

See merge request !291
parents 02db36c5 ca59e8ef
......@@ -140,7 +140,7 @@ class BamMetrics(val root: Configurable) extends QScript
val pcrMetrics = CollectTargetedPcrMetrics(this, inputBam,
ampIntervals, ampIntervals :: roiIntervals.map(_.intervals), outputDir)
add(pcrMetrics)
addSummarizable(chsMetrics, "targeted_pcr_metrics")
addSummarizable(pcrMetrics, "targeted_pcr_metrics")
Intervals(bedFile, ampIntervals)
}
......
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