diff --git a/public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/extensions/CheckChecksum.scala b/public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/extensions/CheckChecksum.scala index 79b46d9d35deec4d4d832468006bfc52f1309ba7..0ae2587f7928bb8d8cfe3e157f79fec7afff031a 100644 --- a/public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/extensions/CheckChecksum.scala +++ b/public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/extensions/CheckChecksum.scala @@ -32,6 +32,8 @@ class CheckChecksum extends InProcessFunction { if (outputChecksum != checksum.toLowerCase) { logger.error(s"Input file: '$inputFile' md5sum is not as expected, aborting pipeline") + + // 130 Simulates a ctr-C Runtime.getRuntime.halt(130) } }