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biopet.biopet
Commits
a868004e
Commit
a868004e
authored
Jul 31, 2017
by
Ruben Vorderman
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Added some scaladocs strings
parent
09ea599c
Changes
1
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5 additions
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9 deletions
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-9
bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BammetricsReport.scala
...c/sasc/biopet/pipelines/bammetrics/BammetricsReport.scala
+5
-9
No files found.
bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BammetricsReport.scala
View file @
a868004e
...
...
@@ -243,7 +243,7 @@ object BammetricsReport extends ReportBuilder {
}
/**
* This is a generic method to create
plots
* This is a generic method to create
a Map that can be turned into a plot
* @param libraryLevel If enabled the plots will show data per library
* @param sampleId If set only this sample is shown
* @param libraryId If set onlt this library is shown
...
...
@@ -357,7 +357,7 @@ object BammetricsReport extends ReportBuilder {
*
* @param outputDir OutputDir for the tsv and png file
* @param prefix Prefix of the tsv and png file
* @param insertSizePlotTables
* @param insertSizePlotTables
Plot map generated by insertSizePlotTables function.
*/
def
insertSizePlot
(
outputDir
:
File
,
prefix
:
String
,
...
...
@@ -461,9 +461,7 @@ object BammetricsReport extends ReportBuilder {
*
* @param outputDir OutputDir for the tsv and png file
* @param prefix Prefix of the tsv and png file
* @param summary Summary class
* @param libraryLevel Default false, when set true plot will be based on library stats instead of sample stats
* @param sampleId Default it selects all sampples, when sample is giving it limits to selected sample
* @param wgsHistogramPlotTables Plot map generated by wgsHistogramPlotTables function.
*/
def
wgsHistogramPlot
(
outputDir
:
File
,
prefix
:
String
,
...
...
@@ -495,10 +493,8 @@ object BammetricsReport extends ReportBuilder {
*
* @param outputDir OutputDir for the tsv and png file
* @param prefix Prefix of the tsv and png file
* @param summary Summary class
* @param libraryLevel Default false, when set true plot will be based on library stats instead of sample stats
* @param sampleId Default it selects all sampples, when sample is giving it limits to selected sample
*/
* @param rnaHistogramPlotTables Plot map generated by rnaHistogramPlotTables function.
*/
def
rnaHistogramPlot
(
outputDir
:
File
,
prefix
:
String
,
rnaHistogramPlotTables
:
Array
[
Map
[
String
,
Array
[
Any
]]],
...
...
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