Commit a611da57 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix compile error

parent 711d36a4
......@@ -84,7 +84,7 @@ class ShivaVariantcalling(val root: Configurable) extends QScript
def biopetScript(): Unit = {
if (inputBams.isEmpty) {
Logging.addError("No input bams found")
inputBams = Map("test", new File("."))
inputBams = Map("test" -> new File("."))
if (callers.isEmpty) Logging.addError("must select at least 1 variantcaller, choices are: " + ShivaVariantcalling.callersList(this).map(", "))
if (!callers.exists(_.mergeVcfResults)) Logging.addError("must select at least 1 variantcaller where merge_vcf_results is true")
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