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biopet.biopet
Commits
9fbc2376
Commit
9fbc2376
authored
Jan 11, 2016
by
Sander Bollen
Browse files
fix tiny setting
parent
6ebf4f39
Changes
1
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public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/bcftools/BcftoolsView.scala
View file @
9fbc2376
...
@@ -23,7 +23,7 @@ class BcftoolsView(val root: Configurable) extends Bcftools {
...
@@ -23,7 +23,7 @@ class BcftoolsView(val root: Configurable) extends Bcftools {
var
headerOnly
:
Boolean
=
config
(
"header_only"
,
false
)
var
headerOnly
:
Boolean
=
config
(
"header_only"
,
false
)
@Argument
(
doc
=
"Compression level"
,
required
=
false
)
@Argument
(
doc
=
"Compression level"
,
required
=
false
)
var
compressionLevel
:
Int
=
9
var
compressionLevel
:
Int
=
config
(
"compression_level"
,
default
=
9
)
@Argument
(
doc
=
"output type"
,
required
=
false
)
@Argument
(
doc
=
"output type"
,
required
=
false
)
var
outputType
:
String
=
"z"
var
outputType
:
String
=
"z"
...
...
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