diff --git a/public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/clever/CleverFixVCF.scala b/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/clever/CleverFixVCF.scala similarity index 97% rename from public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/clever/CleverFixVCF.scala rename to biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/clever/CleverFixVCF.scala index 407c172ec5ff3081833dca1a6493e6c78174165f..b0e49100dff4d021d1b31eb5965f3209080e377c 100644 --- a/public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/clever/CleverFixVCF.scala +++ b/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/clever/CleverFixVCF.scala @@ -4,12 +4,12 @@ package nl.lumc.sasc.biopet.extensions.clever * Created by wyleung on 4-4-16. */ -import java.io.{ File, PrintWriter } +import java.io.{File, PrintWriter} import nl.lumc.sasc.biopet.core.BiopetJavaCommandLineFunction +import nl.lumc.sasc.biopet.utils.ToolCommand import nl.lumc.sasc.biopet.utils.config.Configurable -import nl.lumc.sasc.biopet.utils.{ ToolCommand } -import org.broadinstitute.gatk.utils.commandline.{ Argument, Input, Output } +import org.broadinstitute.gatk.utils.commandline.{Argument, Input, Output} import scala.io.Source