Commit 992d265a authored by Sander Bollen's avatar Sander Bollen
Browse files

autostyle fixes

parent 134d77a4
...@@ -84,7 +84,7 @@ class DepthOfCoverage(val root: Configurable) extends CommandLineGATK { ...@@ -84,7 +84,7 @@ class DepthOfCoverage(val root: Configurable) extends CommandLineGATK {
var includeRefNSites: Boolean = config("include_ref_n_sites", namespace = "depth_of_coverage", default = false) var includeRefNSites: Boolean = config("include_ref_n_sites", namespace = "depth_of_coverage", default = false)
var printBinEndpointsAndExit: Boolean = config("print_bin_endpoint_and_exit", namespace = "depth_of_coverage" , default = false) var printBinEndpointsAndExit: Boolean = config("print_bin_endpoint_and_exit", namespace = "depth_of_coverage", default = false)
override def beforeGraph() = { override def beforeGraph() = {
super.beforeGraph() super.beforeGraph()
......
...@@ -2,7 +2,7 @@ package nl.lumc.sasc.biopet.extensions.xhmm ...@@ -2,7 +2,7 @@ package nl.lumc.sasc.biopet.extensions.xhmm
import java.io.File import java.io.File
import nl.lumc.sasc.biopet.core.{BiopetCommandLineFunction, Version} import nl.lumc.sasc.biopet.core.{ BiopetCommandLineFunction, Version }
/** /**
* Created by Sander Bollen on 23-11-16. * Created by Sander Bollen on 23-11-16.
......
package nl.lumc.sasc.biopet.tools package nl.lumc.sasc.biopet.tools
import java.io.{BufferedWriter, File, FileWriter, PrintWriter} import java.io.{ BufferedWriter, File, FileWriter, PrintWriter }
import nl.lumc.sasc.biopet.tools.VepNormalizer.Args import nl.lumc.sasc.biopet.tools.VepNormalizer.Args
import nl.lumc.sasc.biopet.utils.ToolCommand import nl.lumc.sasc.biopet.utils.ToolCommand
......
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